Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 snoU2-30.1-201ENST00000365012 70 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.97□□□□□ -1.93
CPNE3O75131 COTL1P1-201ENST00000422309 375 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 AC107083.1-201ENST00000439643 279 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.97□□□□□ -1.93
CPNE3O75131 AC008885.1-201ENST00000514930 301 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 RNU7-28P-201ENST00000516759 62 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 AL022345.2-201ENST00000606307 135 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CPNE3O75131 MTND5P32-201ENST00000560711 1802 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CPNE3O75131 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CPNE3O75131 AP006437.1-201ENST00000641440 3685 ntBASIC2.97□□□□□ -1.93
CPNE3O75131 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CPNE3O75131 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CPNE3O75131 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CPNE3O75131 SNORA71.1-201ENST00000364523 117 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 RNU6-476P-201ENST00000384726 107 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 MIR518F-201ENST00000384973 87 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 RNU2-52P-201ENST00000410680 190 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.96□□□□□ -1.94
CPNE3O75131 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.96□□□□□ -1.94
CPNE3O75131 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.96□□□□□ -1.94
CPNE3O75131 EIF4BP1-201ENST00000554881 351 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.96□□□□□ -1.94
CPNE3O75131 AC073476.4-201ENST00000628409 72 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 FAM35CP-201ENST00000554755 2470 ntBASIC2.96□□□□□ -1.94
CPNE3O75131 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CPNE3O75131 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CPNE3O75131 RNU6-1019P-201ENST00000364424 107 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 RNU11-3P-201ENST00000391111 133 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 SNORD77.3-201ENST00000391113 65 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 MIR548O-201ENST00000408583 114 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 RPL32P35-201ENST00000415214 394 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.95□□□□□ -1.94
CPNE3O75131 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.95□□□□□ -1.94
CPNE3O75131 RNU1-143P-201ENST00000516296 146 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 SNORD45.4-201ENST00000516629 73 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 RNA5SP137-201ENST00000516833 135 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 AC084364.2-201ENST00000546924 395 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 MTND5P34-201ENST00000568888 325 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 U1.23-201ENST00000610293 146 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 AC006441.5-201ENST00000612680 209 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 RNU1-68P-201ENST00000615382 146 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 U1.39-201ENST00000621562 146 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 AC006386.2-201ENST00000624491 75 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 AC012005.1-201ENST00000624575 75 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 U6.95-201ENST00000636931 70 ntBASIC2.95□□□□□ -1.94
CPNE3O75131 AL365361.1-201ENST00000566942 3481 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 RNU6-1144P-201ENST00000384247 104 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 SNORA44-201ENST00000384584 132 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 MIR597-201ENST00000384968 97 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 RNU6-440P-201ENST00000390882 105 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 SNORA40.5-201ENST00000391061 128 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 RNA5SP344-201ENST00000411081 104 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.94□□□□□ -1.94
CPNE3O75131 RNA5SP217-201ENST00000515959 91 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 MIR5094-201ENST00000578766 85 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 MIR8054-201ENST00000620877 86 ntBASIC2.94□□□□□ -1.94
CPNE3O75131 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CPNE3O75131 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.94□□□□□ -1.94
CPNE3O75131 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CPNE3O75131 AC022018.1-201ENST00000430685 241 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 STAG3L5P-204ENST00000443759 179 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 SNORA59A-201ENST00000459326 152 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 Y_RNA.651-201ENST00000459380 103 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 RNA5SP236-201ENST00000516169 116 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 RNU6-1149P-201ENST00000516810 97 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 MIR6129-201ENST00000616087 109 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 AL391516.1-201ENST00000554380 2449 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.93□□□□□ -1.94
CPNE3O75131 ICE2P2-201ENST00000483823 2787 ntBASIC2.93□□□□□ -1.94
CPNE3O75131 MIR22-201ENST00000362190 85 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 RNU6-268P-201ENST00000364174 107 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 SNORD58C-201ENST00000365223 64 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 SNORA54-201ENST00000384281 123 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 RNU6-429P-201ENST00000384582 108 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 Y_RNA.617-201ENST00000410920 90 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 Y_RNA.630-201ENST00000411370 108 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 SCARNA20.6-201ENST00000517251 106 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 MIR4658-201ENST00000584344 65 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 SNORA28-201ENST00000606769 126 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 AC134878.1-201ENST00000619901 243 ntBASIC2.92□□□□□ -1.94
CPNE3O75131 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CPNE3O75131 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CPNE3O75131 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CPNE3O75131 AC108206.1-201ENST00000570186 4159 ntBASIC2.91□□□□□ -1.94
CPNE3O75131 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CPNE3O75131 Y_RNA.336-201ENST00000365307 109 ntBASIC2.91□□□□□ -1.94
CPNE3O75131 SNORA80E-201ENST00000384744 137 ntBASIC2.91□□□□□ -1.94
CPNE3O75131 SNORD67-201ENST00000390833 111 ntBASIC2.91□□□□□ -1.94
CPNE3O75131 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.91□□□□□ -1.94
CPNE3O75131 AC069257.2-201ENST00000441819 155 ntBASIC2.91□□□□□ -1.94
CPNE3O75131 AL021397.1-201ENST00000451806 248 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms