Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RNU7-200P-201ENST00000516105 62 ntBASIC2.48□□□□□ -2.01
OPHN1O60890 MIR3169-201ENST00000578032 83 ntBASIC2.48□□□□□ -2.01
OPHN1O60890 AL031274.2-201ENST00000599419 203 ntBASIC2.48□□□□□ -2.01
OPHN1O60890 AC100821.1-201ENST00000523153 2479 ntBASIC2.48□□□□□ -2.01
OPHN1O60890 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
OPHN1O60890 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
OPHN1O60890 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.47□□□□□ -2.01
OPHN1O60890 SNORA33-201ENST00000363664 130 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 RNU6-728P-201ENST00000365375 104 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 SNORD116-18-201ENST00000383961 92 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 RNY3P5-201ENST00000384127 102 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 RNU6-187P-201ENST00000384139 106 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 MIR144-201ENST00000384886 86 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 Y_RNA.580-201ENST00000391004 95 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 AL392103.1-201ENST00000447000 198 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.47□□□□□ -2.01
OPHN1O60890 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.47□□□□□ -2.01
OPHN1O60890 MIR2681-201ENST00000581814 105 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 MTND1P7-201ENST00000632801 297 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 U6.108-201ENST00000637764 58 ntBASIC2.47□□□□□ -2.01
OPHN1O60890 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
OPHN1O60890 AC018630.2-201ENST00000534866 2403 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 RNU1-58P-201ENST00000362413 163 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 RNU6-862P-201ENST00000362804 105 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 SNORA8-201ENST00000384574 139 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 MIR15B-201ENST00000385045 98 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 MIR1289-2-201ENST00000408360 111 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 MIR1278-201ENST00000408753 81 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 Y_RNA.621-201ENST00000411065 96 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.46□□□□□ -2.02
OPHN1O60890 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
OPHN1O60890 AC234781.5-201ENST00000508429 271 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 AC107027.2-201ENST00000512197 115 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 RNA5SP137-201ENST00000516833 135 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.46□□□□□ -2.02
OPHN1O60890 AC024995.1-201ENST00000523014 93 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 MIR6079-201ENST00000635807 62 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.02
OPHN1O60890 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 RNU6-1130P-201ENST00000365434 107 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 RNU6-449P-201ENST00000383914 107 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 RNU6-239P-201ENST00000390990 99 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.45□□□□□ -2.02
OPHN1O60890 AC023449.1-201ENST00000454464 154 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 AC233266.1-201ENST00000454518 96 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 RPL23AP91-201ENST00000569211 455 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 MIR1273D-201ENST00000577266 86 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 AC091178.2-201ENST00000584401 117 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 AL021707.8-201ENST00000609428 183 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 AC242852.1-201ENST00000612151 96 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 AC244015.1-201ENST00000622301 99 ntBASIC2.45□□□□□ -2.02
OPHN1O60890 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
OPHN1O60890 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
OPHN1O60890 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 Y_RNA.587-201ENST00000391210 103 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 SNORA11.4-201ENST00000408823 129 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 BX510359.4-201ENST00000423750 193 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 HMGN2P3-201ENST00000433603 273 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 HMGN2P5-201ENST00000436882 273 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 RPS26P45-201ENST00000471748 340 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 RNU6-561P-201ENST00000516222 102 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 RNU6-1291P-201ENST00000516591 104 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 RNU1-104P-201ENST00000517280 175 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.44□□□□□ -2.02
OPHN1O60890 AC007336.1-201ENST00000576365 3828 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 AC005786.1-201ENST00000588553 154 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.44□□□□□ -2.02
OPHN1O60890 JPX_2.1-201ENST00000614161 69 ntBASIC2.44□□□□□ -2.02
OPHN1O60890 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.44□□□□□ -2.02
OPHN1O60890 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
OPHN1O60890 Y_RNA.267-201ENST00000364679 109 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 RNU6-643P-201ENST00000384018 107 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 MIR562-201ENST00000384894 95 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 MIR764-201ENST00000390811 85 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 Y_RNA.622-201ENST00000411091 108 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 AC006461.1-201ENST00000412637 326 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 AC099677.2-201ENST00000436385 175 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 RNU7-94P-201ENST00000459576 63 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 RNU6-346P-201ENST00000516288 111 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 RNU6-341P-201ENST00000516973 96 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 AL049861.1-201ENST00000603130 150 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 AC103810.6-201ENST00000606708 136 ntBASIC2.43□□□□□ -2.02
OPHN1O60890 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
OPHN1O60890 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.42□□□□□ -2.02
OPHN1O60890 RNU6-1209P-201ENST00000363655 107 ntBASIC2.42□□□□□ -2.02
OPHN1O60890 Y_RNA.796-201ENST00000364268 102 ntBASIC2.42□□□□□ -2.02
OPHN1O60890 Y_RNA.799-201ENST00000364992 102 ntBASIC2.42□□□□□ -2.02
OPHN1O60890 RNU6-1080P-201ENST00000383982 107 ntBASIC2.42□□□□□ -2.02
OPHN1O60890 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.42□□□□□ -2.02
OPHN1O60890 AL163195.1-201ENST00000496941 348 ntBASIC2.42□□□□□ -2.02
OPHN1O60890 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
OPHN1O60890 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.42□□□□□ -2.02
OPHN1O60890 RNU6-789P-201ENST00000517105 102 ntBASIC2.42□□□□□ -2.02
OPHN1O60890 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
OPHN1O60890 SNORD45.3-201ENST00000363836 72 ntBASIC2.41□□□□□ -2.02
OPHN1O60890 Y_RNA.337-201ENST00000365312 102 ntBASIC2.41□□□□□ -2.02
OPHN1O60890 SNORA79-201ENST00000408376 140 ntBASIC2.41□□□□□ -2.02
OPHN1O60890 RNU4-43P-201ENST00000410628 137 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 228.6 ms