Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM13O60858 AC091826.1-201ENST00000514065 313 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 RNY4P20-201ENST00000516678 93 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 RNU7-172P-201ENST00000517125 64 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 RNU6-586P-201ENST00000517265 104 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 MIR4438-201ENST00000585271 93 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 AL590808.1-201ENST00000618696 141 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 MIR376A2-201ENST00000636782 80 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM13O60858 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TRIM13O60858 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM13O60858 RNU1-72P-201ENST00000362976 153 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 Y_RNA.93-201ENST00000363066 109 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 RNU6-1134P-201ENST00000365156 101 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 SNORD21-201ENST00000383953 95 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 RNU6-418P-201ENST00000384035 107 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 RNU6-1274P-201ENST00000384557 107 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 MT-TI-201ENST00000387365 69 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 AL513477.1-202ENST00000417061 214 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 AC022018.1-201ENST00000430685 241 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.72□□□□□ -1.97
TRIM13O60858 SCARNA13-201ENST00000516672 275 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 MIR5197-201ENST00000583721 112 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 AC013412.1-201ENST00000610687 192 ntBASIC2.72□□□□□ -1.97
TRIM13O60858 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
TRIM13O60858 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM13O60858 RNU6-228P-201ENST00000362700 106 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 Y_RNA.344-201ENST00000365381 112 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 FO393413.1-201ENST00000402892 195 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 PGBD4P5-201ENST00000445958 426 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 SNORA84-201ENST00000459229 133 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 Y_RNA.666-201ENST00000516187 112 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 RNA5SP395-201ENST00000516567 118 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 RNU6-826P-201ENST00000516827 104 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 AC084364.2-201ENST00000546924 395 ntBASIC2.71□□□□□ -1.98
TRIM13O60858 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM13O60858 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM13O60858 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
TRIM13O60858 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM13O60858 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
TRIM13O60858 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM13O60858 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 Y_RNA.107-201ENST00000363190 121 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 RNU6-944P-201ENST00000364023 107 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 RNA5SP72-201ENST00000364442 117 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 Y_RNA.466-201ENST00000384294 113 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 Y_RNA.593-201ENST00000410292 98 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 RNA5SP225-201ENST00000410874 135 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 RNA5SP492-201ENST00000411330 114 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM13O60858 RPS29P21-201ENST00000496272 170 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM13O60858 RNU2-34P-201ENST00000516534 121 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 RNU6-1096P-201ENST00000517089 102 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM13O60858 AC008507.4-201ENST00000585464 127 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 MIR5739-201ENST00000619803 80 ntBASIC2.7□□□□□ -1.98
TRIM13O60858 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
TRIM13O60858 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
TRIM13O60858 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM13O60858 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 RNU6-813P-201ENST00000384691 107 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 RNVU1-14-201ENST00000384770 164 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 MIR518F-201ENST00000384973 87 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 MIR759-201ENST00000390224 91 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TRIM13O60858 RNU6-893P-201ENST00000458841 100 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 HMGN1P7-201ENST00000491722 313 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 AC023141.11-201ENST00000508864 202 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 RNU6-693P-201ENST00000516134 107 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 YPEL5P2-201ENST00000605553 359 ntBASIC2.69□□□□□ -1.98
TRIM13O60858 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
TRIM13O60858 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM13O60858 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM13O60858 SNORA38.1-201ENST00000364172 131 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 RNU6-1124P-201ENST00000384169 107 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 MIR548D2-201ENST00000384955 97 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 MIR520G-201ENST00000385064 90 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 AL445687.1-201ENST00000439946 251 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 SNRPGP13-201ENST00000442212 177 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 PRSS3P4-201ENST00000453323 162 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 CYP2C59P-201ENST00000457790 269 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 CKS1BP2-201ENST00000497342 240 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 SNORA74D-201ENST00000516404 141 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM13O60858 AC008739.3-201ENST00000603262 127 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.68□□□□□ -1.98
TRIM13O60858 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM13O60858 RNU6-349P-201ENST00000362402 107 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 Y_RNA.253-201ENST00000364562 112 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 Y_RNA.298-201ENST00000364960 107 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 RNU6-690P-201ENST00000365242 106 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 MIR7-3-201ENST00000384898 110 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 SNRPGP10-201ENST00000432323 225 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 MIR3616-201ENST00000584070 92 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms