Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC100821.1-201ENST00000523153 2479 ntBASIC2.15□□□□□ -2.07
CTNND1O60716 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
CTNND1O60716 AL359851.1-201ENST00000569460 4997 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CTNND1O60716 Y_RNA.44-201ENST00000362676 108 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 RNU6-457P-201ENST00000363999 107 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 U8.7-201ENST00000364940 136 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 SNORA72.4-201ENST00000384174 132 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 RNU6-662P-201ENST00000384253 104 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 SNORA72-201ENST00000384339 132 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CTNND1O60716 FTH1P12-201ENST00000432137 551 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 AC104332.1-201ENST00000440471 797 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 AC108729.3-201ENST00000513484 108 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 Y_RNA.668-201ENST00000516233 93 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 RNU7-115P-201ENST00000516433 55 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 RNU2-56P-201ENST00000516826 190 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 AC011604.1-201ENST00000545978 196 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 MIR4709-201ENST00000577272 72 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 MIR3149-201ENST00000584629 83 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 AL162424.1-201ENST00000602325 221 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 AP003357.1-201ENST00000604497 148 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.14□□□□□ -2.07
CTNND1O60716 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.14□□□□□ -2.07
CTNND1O60716 Y_RNA.217-201ENST00000364214 105 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 RNU6-702P-201ENST00000364982 107 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 SNORA26.5-201ENST00000391215 123 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 RNU2-14P-201ENST00000411053 191 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNND1O60716 RNU6-1132P-201ENST00000459214 107 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 Y_RNA.641-201ENST00000459414 105 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 AL049830.1-201ENST00000468034 425 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 AC117454.1-201ENST00000491120 168 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 RNU7-28P-201ENST00000516759 62 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 AC024405.2-202ENST00000532731 184 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 AC012433.1-201ENST00000588916 398 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 AL929325.1-201ENST00000603096 117 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
CTNND1O60716 RNU6-661P-201ENST00000362409 107 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 SNORA1B-201ENST00000362535 133 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 RNU6-899P-201ENST00000363947 107 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 Y_RNA.193-201ENST00000363979 102 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 RNU6-1048P-201ENST00000364054 107 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 Y_RNA.275-201ENST00000364726 110 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 RNU6-574P-201ENST00000384265 107 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CTNND1O60716 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 RNU6-763P-201ENST00000390865 106 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 RNU2-38P-201ENST00000410856 79 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 Y_RNA.621-201ENST00000411065 96 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.12□□□□□ -2.07
CTNND1O60716 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 U8.19-201ENST00000459095 133 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 RNU7-141P-201ENST00000459304 62 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 Y_RNA.637-201ENST00000459424 114 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 RNU6-1053P-201ENST00000515930 101 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 SNORA28-201ENST00000606769 126 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 AC062037.2-201ENST00000610137 73 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 MIR8081-201ENST00000611533 95 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 U2.14-201ENST00000615943 113 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 MIR548AY-201ENST00000617669 107 ntBASIC2.12□□□□□ -2.07
CTNND1O60716 MIR378A-201ENST00000362177 66 ntBASIC2.11□□□□□ -2.07
CTNND1O60716 Y_RNA.14-201ENST00000362415 103 ntBASIC2.11□□□□□ -2.07
CTNND1O60716 RNU6-1272P-201ENST00000362776 107 ntBASIC2.11□□□□□ -2.07
CTNND1O60716 Y_RNA.164-201ENST00000363709 102 ntBASIC2.11□□□□□ -2.07
CTNND1O60716 Y_RNA.265-201ENST00000364677 108 ntBASIC2.11□□□□□ -2.07
CTNND1O60716 AL034345.1-201ENST00000407768 123 ntBASIC2.11□□□□□ -2.07
CTNND1O60716 AC004817.2-201ENST00000561794 651 ntBASIC2.11□□□□□ -2.07
CTNND1O60716 snoU13.31-201ENST00000607291 104 ntBASIC2.11□□□□□ -2.07
CTNND1O60716 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CTNND1O60716 AC134026.1-201ENST00000623249 2239 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 Y_RNA.352-201ENST00000365439 102 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 RNU6-1031P-201ENST00000384773 107 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 SNORA67.5-201ENST00000391036 107 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 MTCO2P33-201ENST00000402100 465 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 RPL39P38-201ENST00000467018 153 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 RN7SL274P-201ENST00000492268 272 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 AC127455.1-201ENST00000565496 145 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 AC103810.8-201ENST00000607347 118 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 snoU18.1-201ENST00000629629 71 ntBASIC2.1□□□□□ -2.07
CTNND1O60716 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CTNND1O60716 RNU6-414P-201ENST00000363705 104 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 RNU6-740P-201ENST00000364734 105 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 RNU6-1080P-201ENST00000383982 107 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 RNU6-1289P-201ENST00000384431 106 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 Y_RNA.562-201ENST00000384695 113 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 SNORA36B-201ENST00000410438 131 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 BTF3P4-201ENST00000418852 495 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNND1O60716 RNU7-34P-201ENST00000459394 64 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 RPL23AP54-201ENST00000495129 419 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
CTNND1O60716 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
CTNND1O60716 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
CTNND1O60716 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CTNND1O60716 RNA5SP482-201ENST00000391269 118 ntBASIC2.08□□□□□ -2.08
CTNND1O60716 AL603910.2-201ENST00000407268 136 ntBASIC2.08□□□□□ -2.08
CTNND1O60716 MIR548H3-201ENST00000408771 118 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms