Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 RNU6-727P-201ENST00000363592 107 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 SNORD50B-201ENST00000364995 70 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 RNU6-117P-201ENST00000365415 107 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 RNU6-413P-201ENST00000384115 107 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 RNU6-291P-201ENST00000384720 107 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 MT-TY-201ENST00000387409 66 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 SNORA75.4-201ENST00000391278 119 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 RNU6-855P-201ENST00000410395 104 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 RNU4-83P-201ENST00000410863 133 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 BX276092.1-201ENST00000427368 251 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.14□□□□□ -2.59
SSSCA1O60232 AL138752.1-201ENST00000452964 351 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.14□□□□□ -2.59
SSSCA1O60232 AC018710.1-201ENST00000506509 158 ntBASIC-1.14□□□□□ -2.59
SSSCA1O60232 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.14□□□□□ -2.59
SSSCA1O60232 MIR30D-201ENST00000362283 70 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 RNU6-266P-201ENST00000364225 107 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 MIR9-2-201ENST00000384838 87 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 MIR522-201ENST00000385071 87 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 MIR516B1-201ENST00000385211 90 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 U8.17-201ENST00000391292 132 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 RNA5SP475-201ENST00000410568 110 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 SSR1P2-201ENST00000415208 787 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.15□□□□□ -2.59
SSSCA1O60232 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.15□□□□□ -2.59
SSSCA1O60232 MTND3P9-201ENST00000429526 346 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 MTCO2P3-201ENST00000442543 421 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.15□□□□□ -2.59
SSSCA1O60232 RNU6-706P-201ENST00000517229 104 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 RNU7-181P-201ENST00000517234 74 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 AL359999.1-201ENST00000604513 294 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.15□□□□□ -2.59
SSSCA1O60232 MIR382-201ENST00000637119 76 ntBASIC-1.15□□□□□ -2.59
SSSCA1O60232 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 SNORA63C-201ENST00000364578 129 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 SNORD115-44-201ENST00000365391 82 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 RNU6-809P-201ENST00000384461 107 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 RNU6-455P-201ENST00000384681 107 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
SSSCA1O60232 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.16□□□□□ -2.6
SSSCA1O60232 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.16□□□□□ -2.6
SSSCA1O60232 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.16□□□□□ -2.6
SSSCA1O60232 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 GMFBP1-201ENST00000467831 427 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 AC022784.5-201ENST00000522241 437 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 MTND5P34-201ENST00000568888 325 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 BNIP3P40-201ENST00000596017 556 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 AC009159.2-201ENST00000617603 606 ntBASIC-1.16□□□□□ -2.6
SSSCA1O60232 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
SSSCA1O60232 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 AL137792.2-201ENST00000443484 235 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 AC010655.3-201ENST00000478818 450 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 RPL7P42-201ENST00000481005 679 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.17□□□□□ -2.6
SSSCA1O60232 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.17□□□□□ -2.6
SSSCA1O60232 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 AC026421.1-201ENST00000519101 163 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 AC091144.1-201ENST00000519573 138 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 POLR3GP1-201ENST00000594073 261 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 AC023510.2-201ENST00000622162 746 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 AC126544.2-201ENST00000625174 749 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 U6.114-201ENST00000636407 96 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 AC013437.2-201ENST00000639587 677 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 MTND5P18-201ENST00000445624 1801 ntBASIC-1.17□□□□□ -2.6
SSSCA1O60232 RNA5SP245-201ENST00000364239 121 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 RNU4-28P-201ENST00000364739 141 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 RNU6-393P-201ENST00000384475 107 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 MIR517B-201ENST00000385102 67 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 RNA5SP261-201ENST00000410536 106 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.18□□□□□ -2.6
SSSCA1O60232 AL512286.1-201ENST00000439244 400 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 AC116353.2-201ENST00000505332 712 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 AC079140.5-201ENST00000507882 310 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 RNU2-13P-201ENST00000515909 113 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 SNORA25.14-201ENST00000516481 132 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 RNA5SP54-201ENST00000516951 92 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 MTND2P32-201ENST00000521584 1038 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 MIR6851-201ENST00000617060 67 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.18□□□□□ -2.6
SSSCA1O60232 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 RNU6-708P-201ENST00000384217 107 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms