Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.37□□□□□ -2.35
AP3B1O00203 HMGN2P32-201ENST00000444648 269 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 MTND3P10-201ENST00000450967 341 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 RPL30P15-201ENST00000457129 321 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.37□□□□□ -2.35
AP3B1O00203 Y_RNA.676-201ENST00000516393 96 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 Y_RNA.708-201ENST00000516950 96 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 AC093027.1-201ENST00000546698 429 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 MIR4300-201ENST00000581016 96 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 AL078603.1-201ENST00000603824 313 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 AC048344.4-201ENST00000619744 527 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 MIR6513-201ENST00000621188 64 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.37□□□□□ -2.35
AP3B1O00203 MIR4251-201ENST00000635819 61 ntBASIC0.37□□□□□ -2.35
AP3B1O00203 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
AP3B1O00203 Y_RNA.101-201ENST00000363154 102 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 RNU4-24P-201ENST00000364565 139 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 RNU1-133P-201ENST00000364867 167 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 RNA5SP247-201ENST00000411181 105 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 SNRPGP10-201ENST00000432323 225 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 AC105313.1-201ENST00000509121 353 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 RNU4-57P-201ENST00000515980 135 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 MIR2355-201ENST00000517199 87 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 AC006380.1-201ENST00000603598 186 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 AC092794.2-201ENST00000620933 563 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 AC008133.2-201ENST00000624540 351 ntBASIC0.36□□□□□ -2.35
AP3B1O00203 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.36□□□□□ -2.35
AP3B1O00203 Y_RNA.148-201ENST00000363557 117 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 RNU6-601P-201ENST00000384540 107 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 MIR570-201ENST00000384917 97 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 RNU6-131P-201ENST00000391144 107 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 RNU2-54P-201ENST00000410299 190 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 RNU6-613P-201ENST00000410412 108 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 RNU2-61P-201ENST00000411069 191 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 RNU6-120P-201ENST00000516077 103 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 RNU6-966P-201ENST00000516479 104 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.35□□□□□ -2.35
AP3B1O00203 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.35□□□□□ -2.35
AP3B1O00203 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.35□□□□□ -2.35
AP3B1O00203 AC240442.1-201ENST00000616055 283 ntBASIC0.35□□□□□ -2.35
AP3B1O00203 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
AP3B1O00203 MIR1-1-201ENST00000362147 71 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 Y_RNA.368-201ENST00000365547 113 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 RPL17P19-201ENST00000489069 552 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 AC011352.1-201ENST00000512300 793 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 RNU6-1213P-201ENST00000517075 94 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 MIR548AR-201ENST00000582191 57 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 AC005899.2-201ENST00000584353 90 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 AC104695.3-201ENST00000604052 296 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 AC005972.2-201ENST00000604690 348 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
AP3B1O00203 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 RNU6-324P-201ENST00000363957 106 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 RNU6-99P-201ENST00000364721 107 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 SNORA72-201ENST00000384339 132 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 SNORD115-47-201ENST00000391226 86 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 RNU6-177P-201ENST00000411257 104 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 AC016907.1-201ENST00000419483 435 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 MTCO2P27-201ENST00000420740 428 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 AC005534.2-201ENST00000431047 433 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.33□□□□□ -2.36
AP3B1O00203 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.33□□□□□ -2.36
AP3B1O00203 U8.19-201ENST00000459095 133 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 MIR2053-201ENST00000459295 91 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 AC092989.1-201ENST00000481235 277 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 RNA5SP220-201ENST00000516298 104 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 RNU6-1012P-201ENST00000516606 109 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 AL355073.2-201ENST00000612106 557 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
AP3B1O00203 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
AP3B1O00203 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
AP3B1O00203 Y_RNA.339-201ENST00000365325 102 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 RNU6-767P-201ENST00000384132 107 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 Y_RNA.453-201ENST00000384223 109 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 Y_RNA.482-201ENST00000384377 111 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 RNU6-510P-201ENST00000391239 108 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 RNU6-1199P-201ENST00000411249 104 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 MTND4P28-201ENST00000426217 387 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 AC015818.7-201ENST00000428754 109 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 AC087499.7-201ENST00000441958 109 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
AP3B1O00203 CHEK2P4-201ENST00000450340 246 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 snoU13.21-201ENST00000459368 105 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.32□□□□□ -2.36
AP3B1O00203 RNU6-496P-201ENST00000516145 99 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 MIR2115-201ENST00000516657 100 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 Y_RNA.714-201ENST00000517065 90 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 AC060780.3-201ENST00000589464 80 ntBASIC0.32□□□□□ -2.36
AP3B1O00203 RNU6-369P-201ENST00000362515 102 ntBASIC0.31□□□□□ -2.36
AP3B1O00203 Y_RNA.86-201ENST00000363020 111 ntBASIC0.31□□□□□ -2.36
AP3B1O00203 Y_RNA.168-201ENST00000363740 102 ntBASIC0.31□□□□□ -2.36
AP3B1O00203 Y_RNA.436-201ENST00000384097 102 ntBASIC0.31□□□□□ -2.36
AP3B1O00203 RNU6-342P-201ENST00000384521 104 ntBASIC0.31□□□□□ -2.36
AP3B1O00203 NDUFA4P2-201ENST00000489989 244 ntBASIC0.31□□□□□ -2.36
AP3B1O00203 AL355375.2-201ENST00000574825 175 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms