Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF223E7ERA6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF223E7ERA6 SNORA5A-201ENST00000384111 134 ntBASIC3.35□□□□□ -1.87
RNF223E7ERA6 RNU6-649P-201ENST00000384463 107 ntBASIC3.35□□□□□ -1.87
RNF223E7ERA6 MIR491-201ENST00000384877 84 ntBASIC3.35□□□□□ -1.87
RNF223E7ERA6 MTND4LP19-201ENST00000403051 166 ntBASIC3.35□□□□□ -1.87
RNF223E7ERA6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF223E7ERA6 RNU7-79P-201ENST00000516082 62 ntBASIC3.35□□□□□ -1.87
RNF223E7ERA6 RNU7-137P-201ENST00000516788 62 ntBASIC3.35□□□□□ -1.87
RNF223E7ERA6 SNORA70.24-201ENST00000517233 118 ntBASIC3.35□□□□□ -1.87
RNF223E7ERA6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF223E7ERA6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF223E7ERA6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RNF223E7ERA6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF223E7ERA6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF223E7ERA6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF223E7ERA6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RNF223E7ERA6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF223E7ERA6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF223E7ERA6 RNA5SP97-201ENST00000365006 84 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 SNORA25.9-201ENST00000365087 128 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 SNORA9-201ENST00000384215 133 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 MIR34B-201ENST00000385076 84 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 MIR516B2-201ENST00000385190 85 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 AC006483.1-201ENST00000487308 313 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 AC018868.1-201ENST00000491307 315 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 RNU6-70P-201ENST00000516438 60 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 RNU6-687P-201ENST00000516443 89 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 Y_RNA.681-201ENST00000516445 113 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 SCARNA13-201ENST00000516672 275 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 RNA5SP179-201ENST00000517284 121 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 AC091167.4-201ENST00000605079 184 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 AC105081.1-201ENST00000617727 106 ntBASIC3.34□□□□□ -1.87
RNF223E7ERA6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF223E7ERA6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF223E7ERA6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF223E7ERA6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF223E7ERA6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
RNF223E7ERA6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF223E7ERA6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF223E7ERA6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF223E7ERA6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF223E7ERA6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF223E7ERA6 RNU6-161P-201ENST00000363051 106 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 Y_RNA.508-201ENST00000384502 114 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 MIR452-201ENST00000385020 85 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 U8.16-201ENST00000391279 133 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 HMGN1P33-201ENST00000432945 451 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 ABCF2P2-201ENST00000450549 296 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF223E7ERA6 YPEL5P3-201ENST00000547227 352 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 MIR5195-201ENST00000583555 115 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 AL138721.1-201ENST00000616756 179 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 AP001362.1-201ENST00000625165 124 ntBASIC3.33□□□□□ -1.88
RNF223E7ERA6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF223E7ERA6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
RNF223E7ERA6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RNF223E7ERA6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF223E7ERA6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF223E7ERA6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RNF223E7ERA6 RNU6-1072P-201ENST00000384703 107 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 RNU6-443P-201ENST00000384780 107 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 MIR136-201ENST00000385207 82 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 SNORA3.3-201ENST00000408712 125 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 RPS29P4-201ENST00000414733 161 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF223E7ERA6 FGF7P7-201ENST00000514120 227 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 SNORA74D-201ENST00000516404 141 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 RNU6-807P-201ENST00000516805 107 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 AC087499.8-201ENST00000578406 226 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 MIR4796-201ENST00000580742 81 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 MIR432-201ENST00000606207 94 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.32□□□□□ -1.88
RNF223E7ERA6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF223E7ERA6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF223E7ERA6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RNF223E7ERA6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF223E7ERA6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF223E7ERA6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RNF223E7ERA6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF223E7ERA6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF223E7ERA6 RNA5SP22-201ENST00000365393 109 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 Y_RNA.354-201ENST00000365448 111 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 RPS26P28-201ENST00000470806 348 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 SNORA31.10-201ENST00000516482 106 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 MIR3200-201ENST00000580767 85 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 AL512598.1-201ENST00000610158 273 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 MIR8066-201ENST00000617280 78 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 MIR1297-201ENST00000637311 77 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF223E7ERA6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF223E7ERA6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF223E7ERA6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF223E7ERA6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
RNF223E7ERA6 AC245060.5-201ENST00000610778 3293 ntBASIC3.31□□□□□ -1.88
RNF223E7ERA6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF223E7ERA6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RNF223E7ERA6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF223E7ERA6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms