Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC091544.4-201ENST00000555268 342 ntBASIC1.85□□□□□ -2.11
TCRBV7S3A2A0A539 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
TCRBV7S3A2A0A539 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.85□□□□□ -2.11
TCRBV7S3A2A0A539 MIR8054-201ENST00000620877 86 ntBASIC1.85□□□□□ -2.11
TCRBV7S3A2A0A539 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.85□□□□□ -2.11
TCRBV7S3A2A0A539 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 SNORA1B-201ENST00000362535 133 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 Y_RNA.267-201ENST00000364679 109 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 MIR526A2-201ENST00000390198 65 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 AC244636.1-201ENST00000421152 228 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 RPL23AP54-201ENST00000495129 419 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 RNU7-28P-201ENST00000516759 62 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 MIR5694-201ENST00000581190 76 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.84□□□□□ -2.11
TCRBV7S3A2A0A539 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.12
TCRBV7S3A2A0A539 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.203-201ENST00000364106 102 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 SNORA6-201ENST00000384033 151 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 MIR17-201ENST00000385012 84 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-440P-201ENST00000390882 105 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-360P-201ENST00000390944 104 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-437P-201ENST00000459408 95 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 SNORA31.17-201ENST00000516953 127 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 AL929325.1-201ENST00000603096 117 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 AC078938.1-201ENST00000620993 318 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 AL365265.1-201ENST00000621045 234 ntBASIC1.83□□□□□ -2.12
TCRBV7S3A2A0A539 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-653P-201ENST00000363074 106 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.257-201ENST00000364596 102 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 MIR626-201ENST00000385032 94 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 RN7SKP200-201ENST00000410564 320 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 RNU2-7P-201ENST00000410794 178 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 HSPE1P9-201ENST00000440046 311 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 AC233266.1-201ENST00000454518 96 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 AL049830.1-201ENST00000468034 425 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 RNU2-56P-201ENST00000516826 190 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-794P-201ENST00000517261 64 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 AC100767.1-201ENST00000528178 123 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 AC242852.1-201ENST00000612151 96 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 AC244015.1-201ENST00000622301 99 ntBASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.111-201ENST00000363248 100 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.200-201ENST00000364018 102 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.262-201ENST00000364641 102 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 SNORA4.2-201ENST00000365313 147 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-969P-201ENST00000383900 105 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-1080P-201ENST00000383982 107 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.515-201ENST00000384535 112 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 SNORA8.3-201ENST00000384679 139 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 RNA5SP482-201ENST00000391269 118 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.626-201ENST00000411288 95 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 MIR4287-201ENST00000579398 78 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 MIR4648-201ENST00000580107 72 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 MIR2681-201ENST00000581814 105 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 SNORA28-201ENST00000606769 126 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.802-201ENST00000614892 130 ntBASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TCRBV7S3A2A0A539 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 AL596028.1-201ENST00000326971 197 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.293-201ENST00000364908 93 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 MIR1298-201ENST00000408783 112 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 AL445685.2-201ENST00000422551 342 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 RNA5SP233-201ENST00000459153 113 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 snoU13.27-201ENST00000459278 104 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 RNA5SP57-201ENST00000459463 123 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 AC107393.1-201ENST00000512403 346 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 MIR4299-201ENST00000577899 72 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 MIR4724-201ENST00000579485 89 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 MIR4435-1-201ENST00000582552 80 ntBASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.8□□□□□ -2.12
TCRBV7S3A2A0A539 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.199-201ENST00000364014 102 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.253-201ENST00000364562 112 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-1031P-201ENST00000384773 107 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 SNORA12.1-201ENST00000390873 148 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 RNA5SP496-201ENST00000391240 109 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.621-201ENST00000411065 96 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 Z98949.2-201ENST00000440996 144 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 RPL23AP6-201ENST00000446637 472 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 HMGN1P7-201ENST00000491722 313 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 OR9P1P-201ENST00000496431 281 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 MIR4713-201ENST00000582691 75 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 MIR4762-201ENST00000585261 75 ntBASIC1.79□□□□□ -2.12
TCRBV7S3A2A0A539 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms