Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 RNU6-643P-201ENST00000384018 107 ntBASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 AC105272.1-201ENST00000438604 198 ntBASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 TRBV12-1-201ENST00000479785 344 ntBASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 RNU6-126P-201ENST00000516685 103 ntBASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 MTND5P41-201ENST00000517498 206 ntBASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 AL160236.1-201ENST00000556317 195 ntBASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 MIR4635-201ENST00000583759 79 ntBASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 ELOCP29-201ENST00000588193 334 ntBASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHA9Q9Y5H5 Z82195.2-201ENST00000612348 18351 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 SNORA1B-201ENST00000362535 133 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 RNU6-774P-201ENST00000363238 107 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 SNORD45.3-201ENST00000363836 72 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 Y_RNA.337-201ENST00000365312 102 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 SNORA48.1-201ENST00000390879 135 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 SNORA79-201ENST00000408376 140 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 AC007064.1-201ENST00000412238 351 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 RPS27P1-201ENST00000450552 247 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 SNORD77.4-201ENST00000516158 81 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 RNU6-1299P-201ENST00000516316 100 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 Y_RNA.714-201ENST00000517065 90 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 MIR5094-201ENST00000578766 85 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 CTSLP2-204ENST00000629029 392 ntBASIC2.51□□□□□ -2.01
PCDHA9Q9Y5H5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 RNU6-1138P-201ENST00000365359 106 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 SNORD116-18-201ENST00000383961 92 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 Y_RNA.622-201ENST00000411091 108 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 RNU4-61P-201ENST00000411243 107 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 Z92545.1-201ENST00000411782 234 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 AC245047.3-201ENST00000429428 127 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 SNRPGP10-201ENST00000432323 225 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 AC245047.4-201ENST00000433189 144 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 RN7SKP132-201ENST00000516001 208 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 RNU7-28P-201ENST00000516759 62 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 RNU2-56P-201ENST00000516826 190 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 MIR4662B-201ENST00000579498 81 ntBASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA9Q9Y5H5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 RNU6-1130P-201ENST00000365434 107 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 Y_RNA.432-201ENST00000384087 111 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 AC006461.1-201ENST00000412637 326 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 COTL1P1-201ENST00000422309 375 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 OR9P1P-201ENST00000496431 281 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 RNA5SP153-201ENST00000516498 76 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 RNU6-197P-201ENST00000516680 100 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 SNORA31.25-201ENST00000517242 134 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 AC087685.1-201ENST00000587507 141 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 AL033523.1-201ENST00000605153 153 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 AC006386.2-201ENST00000624491 75 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 AC012005.1-201ENST00000624575 75 ntBASIC2.49□□□□□ -2.01
PCDHA9Q9Y5H5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 SNORA3A-201ENST00000364113 130 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 Y_RNA.242-201ENST00000364473 110 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 RNU1-51P-201ENST00000365345 176 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 RNU6-484P-201ENST00000384016 107 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 RNA5SP482-201ENST00000391269 118 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 AL606517.2-201ENST00000442855 241 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 RNA5SP282-201ENST00000516355 108 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 EIF4BP1-201ENST00000554881 351 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 GTF3AP2-201ENST00000557014 266 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 MIR5092-201ENST00000583139 88 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 DNAJC19P2-201ENST00000593340 302 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 AL591926.4-201ENST00000616895 298 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 Y_RNA.778-201ENST00000620203 90 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 U1.36-201ENST00000620684 176 ntBASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA9Q9Y5H5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 MIR126-201ENST00000362291 85 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 SNORA63D-201ENST00000364359 132 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 SNORD50.2-201ENST00000365465 70 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 Y_RNA.400-201ENST00000383963 111 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 RNA5SP109-201ENST00000391010 116 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 SNORA26-201ENST00000391286 122 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 FTH1P12-201ENST00000432137 551 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 RPS12P2-201ENST00000439728 269 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 RNVU1-2-201ENST00000516326 135 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 RNU7-149P-201ENST00000516739 59 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 SUB1P4-201ENST00000566062 339 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 MIR4529-201ENST00000578110 78 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 MIR4762-201ENST00000585261 75 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 MIR7106-201ENST00000612419 65 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 Pinc.1-201ENST00000616452 154 ntBASIC2.47□□□□□ -2.01
PCDHA9Q9Y5H5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms