Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 MT-TF-201ENST00000387314 71 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 RNU6-298P-201ENST00000390888 96 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 SNORD93-201ENST00000408813 74 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 HMGN2P32-201ENST00000444648 269 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 SNORA25.13-201ENST00000516395 103 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 RNU6-551P-201ENST00000516661 103 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 RNU7-181P-201ENST00000517234 74 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 POLR3GP1-201ENST00000594073 261 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 BNIP3P40-201ENST00000596017 556 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 AL445984.1-201ENST00000637834 659 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 AC013437.2-201ENST00000639587 677 ntBASIC-1.47□□□□□ -2.64
AP4S1Q9Y587 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.48□□□□□ -2.65
AP4S1Q9Y587 RNU6-721P-201ENST00000410155 105 ntBASIC-1.48□□□□□ -2.65
AP4S1Q9Y587 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.48□□□□□ -2.65
AP4S1Q9Y587 MTATP6P23-201ENST00000440153 476 ntBASIC-1.48□□□□□ -2.65
AP4S1Q9Y587 RNU6-274P-201ENST00000459566 107 ntBASIC-1.48□□□□□ -2.65
AP4S1Q9Y587 SNORA25.17-201ENST00000517184 124 ntBASIC-1.48□□□□□ -2.65
AP4S1Q9Y587 MIR4280-201ENST00000582178 76 ntBASIC-1.48□□□□□ -2.65
AP4S1Q9Y587 MIR6082-201ENST00000613604 109 ntBASIC-1.48□□□□□ -2.65
AP4S1Q9Y587 RNU6-245P-201ENST00000384020 107 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 MIR9-2-201ENST00000384838 87 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 SNORA40.2-201ENST00000390847 128 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 AL512286.1-201ENST00000439244 400 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 MTCO3P38-201ENST00000468910 766 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 AC010655.3-201ENST00000478818 450 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 RNU6-201P-201ENST00000517100 61 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 AC091144.1-201ENST00000519573 138 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 MTND5P34-201ENST00000568888 325 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 RNU6-86P-201ENST00000606534 107 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 AC009159.2-201ENST00000617603 606 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 AC127459.3-201ENST00000624328 466 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 AC073869.9-201ENST00000641610 120 ntBASIC-1.49□□□□□ -2.65
AP4S1Q9Y587 RNU6-708P-201ENST00000384217 107 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 SNORD56B-201ENST00000384713 71 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 RNU6-535P-201ENST00000384722 107 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 MIR635-201ENST00000384830 98 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 MTCYBP36-201ENST00000404146 440 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 SNORD110-201ENST00000408189 75 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 AC010587.1-201ENST00000505809 469 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 AC022784.5-201ENST00000522241 437 ntBASIC-1.5□□□□□ -2.65
AP4S1Q9Y587 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 RNU6-926P-201ENST00000384075 107 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 SNORD38B-201ENST00000384690 67 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 MIR558-201ENST00000384920 94 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 GMFBP1-201ENST00000467831 427 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 RNU6-830P-201ENST00000516353 107 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 SNORD38.3-201ENST00000516599 73 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 MTND4LP25-201ENST00000570218 163 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 MIR378F-201ENST00000578143 78 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 BNIP3P39-201ENST00000601077 554 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.51□□□□□ -2.65
AP4S1Q9Y587 RNU6-227P-201ENST00000362865 103 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 RNA5SP245-201ENST00000364239 121 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 RNU6-641P-201ENST00000384006 107 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 RNA5SP470-201ENST00000516463 106 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 RNU6-612P-201ENST00000516909 102 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 AC121334.2-201ENST00000605387 271 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 AC002044.1-201ENST00000606707 158 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 AC131235.4-201ENST00000609288 620 ntBASIC-1.52□□□□□ -2.65
AP4S1Q9Y587 RNY4P24-201ENST00000362735 96 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 RNU6-35P-201ENST00000384530 107 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 RNU6-847P-201ENST00000411115 108 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 AL354751.2-201ENST00000415471 210 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 AC006210.1-201ENST00000424882 111 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 AC011352.1-201ENST00000512300 793 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 AC022616.6-201ENST00000520479 119 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 MTND3P13-201ENST00000574391 343 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 MIR548AX-201ENST00000580117 73 ntBASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.53□□□□□ -2.65
AP4S1Q9Y587 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU6-403P-201ENST00000363163 104 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU6-433P-201ENST00000363216 104 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU4-1-201ENST00000363925 141 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 SNORD114-15-201ENST00000364687 72 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 SNORD115-7-201ENST00000365306 82 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU6-723P-201ENST00000383973 107 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 SNORD38C-201ENST00000384381 69 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU6-387P-201ENST00000411331 105 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU2-11P-201ENST00000459191 187 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 AC091179.3-201ENST00000474761 144 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 SNORA25.10-201ENST00000515926 124 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms