Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 AC245102.2-201ENST00000448956 180 ntBASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 AC245047.8-201ENST00000456455 284 ntBASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 SNORD65B-201ENST00000459126 73 ntBASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 RNU2-34P-201ENST00000516534 121 ntBASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 AC127455.1-201ENST00000565496 145 ntBASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 MIR3646-201ENST00000578301 84 ntBASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
PTPN22Q9Y2R2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 RNU6-674P-201ENST00000363831 107 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 RNU4-11P-201ENST00000365287 132 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 RNU6-728P-201ENST00000365375 104 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 MIR15B-201ENST00000385045 98 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 AL606845.1-201ENST00000404881 255 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 AC010154.1-201ENST00000425857 269 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 AC008267.6-201ENST00000441664 139 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 RNU6-498P-201ENST00000459468 107 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 ATP5EP1-201ENST00000510257 156 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 RNU6-948P-201ENST00000516374 107 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 RNA5SP490-201ENST00000517141 136 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 AC103810.6-201ENST00000606708 136 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 AC068647.2-201ENST00000637380 353 ntBASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTPN22Q9Y2R2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 SNORA22C-201ENST00000384614 134 ntBASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 MIR1278-201ENST00000408753 81 ntBASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 AL121914.1-201ENST00000450188 156 ntBASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 AC117454.1-201ENST00000491120 168 ntBASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 MIR4498-201ENST00000577599 66 ntBASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 AC005972.2-201ENST00000604690 348 ntBASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 MIR6873-201ENST00000622788 63 ntBASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PTPN22Q9Y2R2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-1290P-201ENST00000362957 109 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 SNORD116-13-201ENST00000384408 92 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 RNA5SP496-201ENST00000391240 109 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-735P-201ENST00000410612 107 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 Y_RNA.629-201ENST00000411368 105 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 AC008134.1-201ENST00000420943 193 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 MTND4LP9-201ENST00000427694 174 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 AL137159.1-201ENST00000452808 512 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 RNU7-197P-201ENST00000458836 62 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 AC108729.3-201ENST00000513484 108 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 SNORA4.4-201ENST00000515921 135 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-1053P-201ENST00000515930 101 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 AC025647.1-201ENST00000517879 253 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 AL365222.1-201ENST00000614661 98 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 MIR3658-201ENST00000636291 56 ntBASIC2.76□□□□□ -1.97
PTPN22Q9Y2R2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 AC092881.1-201ENST00000638218 2733 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 AC100821.1-201ENST00000523153 2479 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 MT-TT-201ENST00000387460 66 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 RN7SKP101-201ENST00000411376 320 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 AC006461.1-201ENST00000412637 326 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 AC010531.2-201ENST00000465012 153 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 RNA5SP20-201ENST00000515976 84 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-826P-201ENST00000516827 104 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 CYCSP26-201ENST00000534107 320 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 AC112693.2-201ENST00000556538 232 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 POLR3GP1-201ENST00000594073 261 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.75□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-199P-201ENST00000362954 107 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 RNA5SP205-201ENST00000364653 136 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-117P-201ENST00000365415 107 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 MIR539-201ENST00000365690 78 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 SNORA64-201ENST00000384674 134 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-383P-201ENST00000410864 94 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-57P-201ENST00000411348 103 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 SRIP3-201ENST00000413200 219 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 EDDM3CP-201ENST00000415977 425 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 SNORA25.12-201ENST00000516202 82 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 AC004486.1-201ENST00000546846 233 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 MIR1248-201ENST00000629190 106 ntBASIC2.74□□□□□ -1.97
PTPN22Q9Y2R2 AC016717.2-201ENST00000609089 5141 ntBASIC2.73□□□□□ -1.97
PTPN22Q9Y2R2 CENPCP1-201ENST00000533085 2578 ntBASIC2.73□□□□□ -1.97
PTPN22Q9Y2R2 RNA5SP456-201ENST00000364002 114 ntBASIC2.73□□□□□ -1.97
PTPN22Q9Y2R2 RNU6-407P-201ENST00000365280 104 ntBASIC2.73□□□□□ -1.97
PTPN22Q9Y2R2 Y_RNA.393-201ENST00000383936 102 ntBASIC2.73□□□□□ -1.97
PTPN22Q9Y2R2 SNORD14D-201ENST00000384390 87 ntBASIC2.73□□□□□ -1.97
PTPN22Q9Y2R2 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
PTPN22Q9Y2R2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.73□□□□□ -1.97
PTPN22Q9Y2R2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms