Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 RNU6-862P-201ENST00000362804 105 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 SNORA5B-201ENST00000363786 132 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 SNORD24-201ENST00000383884 75 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 MIR522-201ENST00000385071 87 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 MIRLET7F2-201ENST00000385277 83 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 SNORD77.3-201ENST00000391113 65 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 AC107083.1-201ENST00000439643 279 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 RN7SL442P-201ENST00000473804 320 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 RNU6-1149P-201ENST00000516810 97 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 MIR4679-2-201ENST00000578358 77 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 AC006023.1-201ENST00000603944 259 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 MIR7153-201ENST00000637758 57 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 ICE2P2-201ENST00000483823 2787 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 SNORD68-201ENST00000363214 84 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 Y_RNA.346-201ENST00000365385 112 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 AC009238.1-201ENST00000442165 424 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 SNRPGP13-201ENST00000442212 177 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 AC009237.6-201ENST00000446969 424 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 AL358944.1-201ENST00000528537 144 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 MIR3124-201ENST00000582636 67 ntBASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.18□□□□□ -1.9
FNDC3AQ9Y2H6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 RNU6-160P-201ENST00000384591 107 ntBASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 FTH1P12-201ENST00000432137 551 ntBASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 RNU1-131P-201ENST00000458943 161 ntBASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 AC008885.1-201ENST00000514930 301 ntBASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 Y_RNA.714-201ENST00000517065 90 ntBASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 AP002004.2-201ENST00000531656 154 ntBASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 MIR376A2-201ENST00000636782 80 ntBASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 AC008555.8-201ENST00000623602 2168 ntBASIC3.17□□□□□ -1.9
FNDC3AQ9Y2H6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 MIR518F-201ENST00000384973 87 ntBASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 MIR802-201ENST00000390235 94 ntBASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 RN7SL636P-201ENST00000497504 294 ntBASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.16□□□□□ -1.9
FNDC3AQ9Y2H6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FNDC3AQ9Y2H6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
FNDC3AQ9Y2H6 SNORD56.3-201ENST00000363507 71 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 RNA5SP493-201ENST00000364115 91 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 RNU6-805P-201ENST00000365643 106 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 SNORD67-201ENST00000390833 111 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 SCARNA15-202ENST00000516881 127 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 AC104027.1-201ENST00000521887 300 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 AC091544.4-201ENST00000555268 342 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 MIR5047-201ENST00000579212 100 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 RPL12P50-201ENST00000603116 116 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FNDC3AQ9Y2H6 SNORD115-3-201ENST00000363100 82 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 SNORA7.4-201ENST00000384249 137 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 Y_RNA.528-201ENST00000384575 108 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 AC007064.1-201ENST00000412238 351 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 AL445687.1-201ENST00000439946 251 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 RNA5SP217-201ENST00000515959 91 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 RNA5SP170-201ENST00000517150 101 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 MIR3616-201ENST00000584070 92 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 AC087685.1-201ENST00000587507 141 ntBASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FNDC3AQ9Y2H6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FNDC3AQ9Y2H6 RNU6-1084P-201ENST00000362498 107 ntBASIC3.13□□□□□ -1.91
FNDC3AQ9Y2H6 RNU6-880P-201ENST00000384526 107 ntBASIC3.13□□□□□ -1.91
FNDC3AQ9Y2H6 CST2P1-201ENST00000425770 87 ntBASIC3.13□□□□□ -1.91
FNDC3AQ9Y2H6 AC099677.2-201ENST00000436385 175 ntBASIC3.13□□□□□ -1.91
FNDC3AQ9Y2H6 AL606517.2-201ENST00000442855 241 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms