Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 RPEP5-201ENST00000441137 268 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 STAG3L5P-204ENST00000443759 179 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 RNU6-155P-201ENST00000516347 100 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 RN7SKP295-201ENST00000517264 153 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 AL358944.1-201ENST00000528537 144 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 AP002004.2-201ENST00000531656 154 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 PART1_1.1-201ENST00000611761 217 ntBASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.32□□□□□ -2.2
NCKAP1Q9Y2A7 AC005592.1-201ENST00000566527 1640 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 RNU6-424P-201ENST00000384367 105 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.535-201ENST00000384612 99 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 MIR660-201ENST00000385235 97 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.645-201ENST00000391229 102 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.604-201ENST00000410574 102 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 Z98949.2-201ENST00000440996 144 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 RPS4XP11-201ENST00000446897 772 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 AC010655.3-201ENST00000478818 450 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 SNORA70.12-201ENST00000516084 153 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 RNA5SP168-201ENST00000516642 112 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 RNU7-28P-201ENST00000516759 62 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 SNORA28-201ENST00000606769 126 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 AC040896.1-201ENST00000613819 479 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 AL160413.1-201ENST00000622780 310 ntBASIC1.31□□□□□ -2.2
NCKAP1Q9Y2A7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 SNORD63-201ENST00000384262 68 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 RNU6-308P-201ENST00000390957 107 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 U8.16-201ENST00000391279 133 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 CALM2P4-201ENST00000430810 426 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 AC040926.1-201ENST00000530195 238 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 RPS29P30-201ENST00000600975 111 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.772-201ENST00000606692 102 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 AC004832.4-201ENST00000608952 331 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 AL078604.3-201ENST00000615580 211 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 AC090971.5-201ENST00000621102 293 ntBASIC1.3□□□□□ -2.2
NCKAP1Q9Y2A7 RNU4-41P-201ENST00000364426 143 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.813-201ENST00000364639 102 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.329-201ENST00000365209 107 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 AC005042.3-201ENST00000453230 174 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 AL049830.1-201ENST00000468034 425 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 SNORA25.10-201ENST00000515926 124 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 SNORD3E-202ENST00000627253 216 ntBASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.29□□□□□ -2.2
NCKAP1Q9Y2A7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.148-201ENST00000363557 117 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 RNA5SP259-201ENST00000365541 109 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 Y_RNA.551-201ENST00000384661 102 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 RNA5SP482-201ENST00000391269 118 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 SNX2P2-201ENST00000424553 323 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 U8.20-201ENST00000459445 131 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 RPL39P38-201ENST00000467018 153 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 AC092991.1-201ENST00000477176 376 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 RNA5SP61-201ENST00000516453 100 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 RNU2-56P-201ENST00000516826 190 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 MIR3937-201ENST00000580135 106 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 AL121890.5-201ENST00000620848 304 ntBASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
NCKAP1Q9Y2A7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 RNU4-50P-201ENST00000364361 141 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 SNORD14.1-201ENST00000365609 90 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 Y_RNA.460-201ENST00000384255 102 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 RNU6-937P-201ENST00000384325 106 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 Y_RNA.526-201ENST00000384572 110 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 MIR653-201ENST00000385279 96 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 MIR1276-201ENST00000408707 83 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 AL390729.2-201ENST00000416137 156 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 RPS20P10-201ENST00000451209 253 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 MIR3664-201ENST00000579074 99 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 AC104695.3-201ENST00000604052 296 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
NCKAP1Q9Y2A7 Y_RNA.28-201ENST00000362554 111 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 Y_RNA.138-201ENST00000363462 102 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 Y_RNA.143-201ENST00000363520 106 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 RNU6-324P-201ENST00000363957 106 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 Y_RNA.439-201ENST00000384119 94 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 Y_RNA.445-201ENST00000384168 102 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 Y_RNA.471-201ENST00000384312 102 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 AL135790.2-201ENST00000437701 267 ntBASIC1.26□□□□□ -2.21
NCKAP1Q9Y2A7 AC233266.1-201ENST00000454518 96 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms