Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AL031274.2-201ENST00000599419 203 ntBASIC3.21□□□□□ -1.9
SPG7Q9UQ90 AL049861.1-201ENST00000603130 150 ntBASIC3.21□□□□□ -1.9
SPG7Q9UQ90 AC012640.5-201ENST00000623897 319 ntBASIC3.21□□□□□ -1.9
SPG7Q9UQ90 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
SPG7Q9UQ90 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SPG7Q9UQ90 AC245060.5-201ENST00000610778 3293 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SPG7Q9UQ90 AC016717.2-201ENST00000609089 5141 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 RNU1-96P-201ENST00000364163 162 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 RNU4-11P-201ENST00000365287 132 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 RNU6-160P-201ENST00000384591 107 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 RNA5SP467-201ENST00000391274 118 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 EDDM3CP-201ENST00000415977 425 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.2□□□□□ -1.9
SPG7Q9UQ90 AL353689.1-201ENST00000438895 199 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.2□□□□□ -1.9
SPG7Q9UQ90 IGKV3-31-201ENST00000523109 329 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 AC103810.6-201ENST00000606708 136 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 AC046143.2-201ENST00000609789 160 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 MIR338-201ENST00000636369 67 ntBASIC3.2□□□□□ -1.9
SPG7Q9UQ90 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.19□□□□□ -1.9
SPG7Q9UQ90 SNORD45.3-201ENST00000363836 72 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 RNA5SP492-201ENST00000411330 114 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 RPS15AP28-201ENST00000435088 386 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 AC245102.2-201ENST00000448956 180 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 RNU6-426P-201ENST00000516464 97 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 RPL23AP91-201ENST00000569211 455 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 AL021707.8-201ENST00000609428 183 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 AC091895.1-201ENST00000624494 256 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 MIR1291-201ENST00000627649 87 ntBASIC3.19□□□□□ -1.9
SPG7Q9UQ90 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.19□□□□□ -1.9
SPG7Q9UQ90 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
SPG7Q9UQ90 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SPG7Q9UQ90 Y_RNA.568-201ENST00000384742 113 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 Y_RNA.621-201ENST00000411065 96 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 ATP5J2P3-201ENST00000451550 258 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.18□□□□□ -1.9
SPG7Q9UQ90 RNU1-131P-201ENST00000458943 161 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 RNA5SP272-201ENST00000516095 111 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 RNU7-99P-201ENST00000516271 62 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 RNA5SP281-201ENST00000516504 135 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 RNU7-128P-201ENST00000517247 62 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.18□□□□□ -1.9
SPG7Q9UQ90 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.18□□□□□ -1.9
SPG7Q9UQ90 MIR1273D-201ENST00000577266 86 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 MIR548X2-201ENST00000579776 100 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 AL359075.3-201ENST00000613288 217 ntBASIC3.18□□□□□ -1.9
SPG7Q9UQ90 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SPG7Q9UQ90 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 RNU6-199P-201ENST00000362954 107 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 SNORD113-1-201ENST00000365321 69 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 MIR520G-201ENST00000385064 90 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 MIR569-201ENST00000385228 96 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 SNORD37.2-201ENST00000391075 66 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 AC026436.1-201ENST00000510537 270 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 MIR2681-201ENST00000581814 105 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 AL353149.1-201ENST00000610667 244 ntBASIC3.17□□□□□ -1.9
SPG7Q9UQ90 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPG7Q9UQ90 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPG7Q9UQ90 SNORD115-3-201ENST00000363100 82 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 SNORA33-201ENST00000363664 130 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 Y_RNA.521-201ENST00000384560 114 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 SNORA79-201ENST00000408376 140 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 RNU4-43P-201ENST00000410628 137 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 SNRPGP8-201ENST00000454064 226 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 AC233266.1-201ENST00000454518 96 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 RNU6-237P-201ENST00000515985 71 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 SNORA25.12-201ENST00000516202 82 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 AC242852.1-201ENST00000612151 96 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 AC244015.1-201ENST00000622301 99 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPG7Q9UQ90 AC100821.1-201ENST00000523153 2479 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 ZNF702P-202ENST00000434269 1966 ntBASIC3.16□□□□□ -1.9
SPG7Q9UQ90 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SPG7Q9UQ90 RNA5SP323-201ENST00000391094 133 ntBASIC3.15□□□□□ -1.91
SPG7Q9UQ90 MIR513C-201ENST00000401352 84 ntBASIC3.15□□□□□ -1.91
SPG7Q9UQ90 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
SPG7Q9UQ90 AC023449.1-201ENST00000454464 154 ntBASIC3.15□□□□□ -1.91
SPG7Q9UQ90 RNU7-26P-201ENST00000458980 63 ntBASIC3.15□□□□□ -1.91
SPG7Q9UQ90 RNU6-1291P-201ENST00000516591 104 ntBASIC3.15□□□□□ -1.91
SPG7Q9UQ90 RPPH1-2P-201ENST00000516688 293 ntBASIC3.15□□□□□ -1.91
SPG7Q9UQ90 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SPG7Q9UQ90 RNU6-1209P-201ENST00000363655 107 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 Y_RNA.796-201ENST00000364268 102 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 Y_RNA.799-201ENST00000364992 102 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 RNU6-81P-201ENST00000365608 104 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 RNU6-1080P-201ENST00000383982 107 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 RNU1-142P-201ENST00000516682 145 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 AC007536.1-201ENST00000533382 349 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 AC026271.5-201ENST00000577873 130 ntBASIC3.14□□□□□ -1.91
SPG7Q9UQ90 RNA5SP493-201ENST00000364115 91 ntBASIC3.13□□□□□ -1.91
SPG7Q9UQ90 Y_RNA.432-201ENST00000384087 111 ntBASIC3.13□□□□□ -1.91
SPG7Q9UQ90 RNU6-768P-201ENST00000384683 107 ntBASIC3.13□□□□□ -1.91
SPG7Q9UQ90 RNU11-5P-201ENST00000391216 129 ntBASIC3.13□□□□□ -1.91
SPG7Q9UQ90 AL117342.1-201ENST00000404861 406 ntBASIC3.13□□□□□ -1.91
SPG7Q9UQ90 RPL30P13-201ENST00000418873 348 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms