Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 MIR3149-201ENST00000584629 83 ntBASIC1.94□□□□□ -2.1
FBXO40Q9UH90 AL512605.2-201ENST00000592972 256 ntBASIC1.94□□□□□ -2.1
FBXO40Q9UH90 U1.36-201ENST00000620684 176 ntBASIC1.94□□□□□ -2.1
FBXO40Q9UH90 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
FBXO40Q9UH90 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
FBXO40Q9UH90 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
FBXO40Q9UH90 Y_RNA.361-201ENST00000365515 120 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 RNU6-463P-201ENST00000384340 107 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 RNU6-710P-201ENST00000410424 105 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 RNA5SP511-201ENST00000410487 115 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 SERF1AP1-201ENST00000514575 187 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 RNU6-1053P-201ENST00000515930 101 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 RNU7-99P-201ENST00000516271 62 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 RNU7-128P-201ENST00000517247 62 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.93□□□□□ -2.1
FBXO40Q9UH90 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
FBXO40Q9UH90 U4.1-201ENST00000620349 87 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 U6.108-201ENST00000637764 58 ntBASIC1.93□□□□□ -2.1
FBXO40Q9UH90 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
FBXO40Q9UH90 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
FBXO40Q9UH90 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
FBXO40Q9UH90 Y_RNA.54-201ENST00000362766 105 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 RNU4-13P-201ENST00000364019 141 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 RNU6-1048P-201ENST00000364054 107 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 RNU6-1019P-201ENST00000364424 107 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 RNU6-326P-201ENST00000365480 107 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 RNU6-662P-201ENST00000384253 104 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 MIR515-2-201ENST00000384883 83 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 MIR515-1-201ENST00000384884 83 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 RNA5SP109-201ENST00000391010 116 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 BTF3P4-201ENST00000418852 495 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 AC245047.4-201ENST00000433189 144 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 HSPE1P21-201ENST00000438283 308 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 AC091959.1-201ENST00000495857 238 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 RNU6-191P-201ENST00000516295 94 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 AC068647.2-201ENST00000637380 353 ntBASIC1.92□□□□□ -2.1
FBXO40Q9UH90 Y_RNA.136-201ENST00000363444 102 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 Y_RNA.193-201ENST00000363979 102 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 Y_RNA.267-201ENST00000364679 109 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 RNU6-702P-201ENST00000364982 107 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 Y_RNA.477-201ENST00000384352 108 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.91□□□□□ -2.1
FBXO40Q9UH90 AL135790.2-201ENST00000437701 267 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 AL606517.2-201ENST00000442855 241 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 AC233266.1-201ENST00000454518 96 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 AC091021.1-201ENST00000468051 388 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 CBX3P4-201ENST00000538909 354 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 AC242852.1-201ENST00000612151 96 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 AC244015.1-201ENST00000622301 99 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 AC134026.1-201ENST00000623249 2239 ntBASIC1.91□□□□□ -2.1
FBXO40Q9UH90 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
FBXO40Q9UH90 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
FBXO40Q9UH90 Y_RNA.556-201ENST00000384677 113 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 Y_RNA.621-201ENST00000411065 96 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 AC010154.1-201ENST00000425857 269 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 RPS20P10-201ENST00000451209 253 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 RNU6-1291P-201ENST00000516591 104 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 AC024995.1-201ENST00000523014 93 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 AC015720.1-201ENST00000565251 277 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 AC012433.1-201ENST00000588916 398 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.9□□□□□ -2.11
FBXO40Q9UH90 AC004832.4-201ENST00000608952 331 ntBASIC1.9□□□□□ -2.11
FBXO40Q9UH90 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
FBXO40Q9UH90 Y_RNA.4-201ENST00000362333 112 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 SNORD114-7-201ENST00000362520 77 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 RNU6-117P-201ENST00000365415 107 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 Y_RNA.452-201ENST00000384202 108 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 RNU6-1248P-201ENST00000391096 64 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 AP1B1P2-201ENST00000416196 106 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.89□□□□□ -2.11
FBXO40Q9UH90 HSPE1P13-201ENST00000451143 297 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 SNORD127-201ENST00000458892 86 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 RNU6-1096P-201ENST00000517089 102 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 SUB1P4-201ENST00000566062 339 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
FBXO40Q9UH90 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
FBXO40Q9UH90 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
FBXO40Q9UH90 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
FBXO40Q9UH90 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
FBXO40Q9UH90 RNU6-112P-201ENST00000363599 104 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 Y_RNA.310-201ENST00000365063 113 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 MIR520A-201ENST00000384862 85 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 MTCO2P33-201ENST00000402100 465 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 RNA5SP100-201ENST00000410903 110 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 RNA5SP59-201ENST00000410922 110 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 RNU2-14P-201ENST00000411053 191 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 MTND4LP30-201ENST00000454092 297 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.88□□□□□ -2.11
FBXO40Q9UH90 RNU6-1132P-201ENST00000459214 107 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.88□□□□□ -2.11
FBXO40Q9UH90 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.88□□□□□ -2.11
FBXO40Q9UH90 RNA5SP437-201ENST00000517249 129 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms