Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 AL022345.2-201ENST00000606307 135 ntBASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 AL021707.8-201ENST00000609428 183 ntBASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 AL161431.1-201ENST00000618966 4205 ntBASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 Y_RNA.52-201ENST00000362760 96 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 RNU6-674P-201ENST00000363831 107 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 Y_RNA.528-201ENST00000384575 108 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 SNORD67-201ENST00000390833 111 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 MIR1263-201ENST00000408324 86 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 MIR1255A-201ENST00000408338 113 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 AC097463.2-201ENST00000421074 142 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 AC010531.2-201ENST00000465012 153 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LMCD1Q9NZU5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 Y_RNA.244-201ENST00000364484 109 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 RNU6-1113P-201ENST00000384348 107 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 MIR196B-201ENST00000384852 84 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 Y_RNA.593-201ENST00000410292 98 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 RNU2-70P-201ENST00000410718 179 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 RNU2-55P-201ENST00000411146 174 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 AC008134.1-201ENST00000420943 193 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 MTATP8P2-201ENST00000435212 202 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 RPL36AP21-201ENST00000490372 323 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 AL929325.1-201ENST00000603096 117 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 SNORD115-40-201ENST00000606510 82 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 MIR7843-201ENST00000622274 79 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMCD1Q9NZU5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 AP006437.1-201ENST00000641440 3685 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 Y_RNA.91-201ENST00000363042 107 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 RNU1-105P-201ENST00000363470 161 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 RNU6-1296P-201ENST00000383879 107 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 MIR504-201ENST00000385065 83 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 MIR767-201ENST00000390228 109 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 MIR300-201ENST00000401138 83 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 MIR891A-201ENST00000401237 79 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 SNORA19.1-201ENST00000410656 129 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 HMGN2P35-201ENST00000412164 270 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 RNU1-143P-201ENST00000516296 146 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 RNU6-56P-201ENST00000516986 93 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 RNU6-711P-201ENST00000517255 106 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 AC026421.1-201ENST00000519101 163 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 RPL23AP91-201ENST00000569211 455 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 AC097639.2-201ENST00000603159 172 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 FAM71BP1-201ENST00000604431 523 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 U1.23-201ENST00000610293 146 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 RNU1-68P-201ENST00000615382 146 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 Y_RNA.818-201ENST00000618813 71 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 U1.39-201ENST00000621562 146 ntBASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMCD1Q9NZU5 AL159152.1-201ENST00000635019 2587 ntBASIC3.15□□□□□ -1.9
LMCD1Q9NZU5 Y_RNA.342-201ENST00000365352 113 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 MIR1294-201ENST00000408503 142 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 RNA5SP492-201ENST00000411330 114 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 AL513328.1-201ENST00000446460 224 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 AL021397.1-201ENST00000451806 248 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 SNORD109B-201ENST00000458961 67 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 SNORD109A-201ENST00000459128 67 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 RNU6-221P-201ENST00000459541 99 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 RNU1-104P-201ENST00000517280 175 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 MIR3202-2-201ENST00000635980 79 ntBASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.91
LMCD1Q9NZU5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 RNU6-418P-201ENST00000384035 107 ntBASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 RNU6-975P-201ENST00000384296 105 ntBASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 MIR9-1-201ENST00000385198 89 ntBASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 uc_338.4-201ENST00000616635 176 ntBASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMCD1Q9NZU5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 Y_RNA.634-201ENST00000364811 113 ntBASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 RNU6-1134P-201ENST00000365156 101 ntBASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 RNA5SP354-201ENST00000391247 136 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms