Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 SNORD53-201ENST00000579969 78 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 AL359075.3-201ENST00000613288 217 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 AC064859.1-201ENST00000624741 174 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 MIR504-201ENST00000385065 83 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 SRIP3-201ENST00000413200 219 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 EDDM3CP-201ENST00000415977 425 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 AL353689.1-201ENST00000438895 199 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 RPL39P40-201ENST00000445481 146 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 snoU13.26-201ENST00000459452 105 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 RNA5SP24-201ENST00000516478 95 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 AC091178.2-201ENST00000584401 117 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 MIR338-201ENST00000636369 67 ntBASIC3.11□□□□□ -1.91
TMEM39AQ9NV64 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 SNORD18B-201ENST00000365659 72 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 NDUFA4P2-201ENST00000489989 244 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 HMGN1P7-201ENST00000491722 313 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 Y_RNA.712-201ENST00000517011 92 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 RNU6-365P-201ENST00000517113 106 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 AC104027.1-201ENST00000521887 300 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 MIR4524B-201ENST00000581569 115 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 MIR3616-201ENST00000584070 92 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TMEM39AQ9NV64 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 U8.2-201ENST00000363156 134 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 Y_RNA.267-201ENST00000364679 109 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 MLLT10P1-201ENST00000418346 262 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 AL158823.1-201ENST00000418441 478 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 SNRPGP10-201ENST00000432323 225 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 SNORA18.4-201ENST00000516440 124 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 RNA5SP148-201ENST00000516527 94 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 RNU1-142P-201ENST00000516682 145 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 MIR6079-201ENST00000635807 62 ntBASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
TMEM39AQ9NV64 AC018630.2-201ENST00000534866 2403 ntBASIC3.09□□□□□ -1.92
TMEM39AQ9NV64 AC008264.2-201ENST00000610193 3731 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 SNORD114-6-201ENST00000364393 72 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 Y_RNA.253-201ENST00000364562 112 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 SNORA12.1-201ENST00000390873 148 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 RNU6-1064P-201ENST00000410626 104 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 RNA5SP21-201ENST00000410917 96 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 AL158147.1-201ENST00000443970 75 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 MIR4769-201ENST00000584126 77 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 U6.108-201ENST00000637764 58 ntBASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.08□□□□□ -1.92
TMEM39AQ9NV64 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 AL391516.1-201ENST00000554380 2449 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 Y_RNA.99-201ENST00000363138 105 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 MRPS17P9-201ENST00000511924 393 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 AC096725.1-201ENST00000514266 313 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 RNU6-772P-201ENST00000516042 105 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 RNU6-341P-201ENST00000516973 96 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 AC245166.1-201ENST00000521012 253 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 MIR3121-201ENST00000579680 77 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 AL353149.1-201ENST00000610667 244 ntBASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.07□□□□□ -1.92
TMEM39AQ9NV64 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 Y_RNA.66-201ENST00000362862 102 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 Y_RNA.114-201ENST00000363265 113 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNU6-476P-201ENST00000384726 107 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNA5SP323-201ENST00000391094 133 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 AL603914.1-201ENST00000401964 204 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 ATP5J2P3-201ENST00000451550 258 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNU1-131P-201ENST00000458943 161 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 328.3 ms