Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 Y_RNA.173-201ENST00000363776 113 ntBASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 RNA5SP175-201ENST00000364275 119 ntBASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 RNU6-1031P-201ENST00000384773 107 ntBASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 MIR29C-201ENST00000385231 88 ntBASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 RNU6-519P-201ENST00000410590 108 ntBASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 RNU6-602P-201ENST00000411155 105 ntBASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 CYCSP19-201ENST00000411715 316 ntBASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 AC079587.1-201ENST00000603846 277 ntBASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
FOXD4L1Q9NU39 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 SNORD114-10-201ENST00000363409 72 ntBASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 MIR181B2-201ENST00000385004 89 ntBASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 RNU6-1321P-201ENST00000390905 107 ntBASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 RNU7-79P-201ENST00000516082 62 ntBASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 AC006064.5-201ENST00000541782 248 ntBASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 AL449363.1-201ENST00000617815 186 ntBASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 ANKRD18EP-201ENST00000405487 2632 ntBASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXD4L1Q9NU39 Y_RNA.98-201ENST00000363109 102 ntBASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 RNU1-109P-201ENST00000383960 147 ntBASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 AC104332.2-201ENST00000429959 156 ntBASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 AC110768.1-201ENST00000509222 400 ntBASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 AC105081.1-201ENST00000617727 106 ntBASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.01□□□□□ -1.61
FOXD4L1Q9NU39 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5□□□□□ -1.61
FOXD4L1Q9NU39 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
FOXD4L1Q9NU39 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC5□□□□□ -1.61
FOXD4L1Q9NU39 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5□□□□□ -1.61
FOXD4L1Q9NU39 RNU6-129P-201ENST00000391022 107 ntBASIC5□□□□□ -1.61
FOXD4L1Q9NU39 RNU7-48P-201ENST00000458875 63 ntBASIC5□□□□□ -1.61
FOXD4L1Q9NU39 FAM106DP-201ENST00000586416 501 ntBASIC5□□□□□ -1.61
FOXD4L1Q9NU39 MIR6798-201ENST00000612887 67 ntBASIC5□□□□□ -1.61
FOXD4L1Q9NU39 FAS-AS1.1-201ENST00000615327 126 ntBASIC5□□□□□ -1.61
FOXD4L1Q9NU39 RN7SL722P-201ENST00000617780 284 ntBASIC5□□□□□ -1.61
FOXD4L1Q9NU39 RN7SL565P-201ENST00000618246 284 ntBASIC5□□□□□ -1.61
FOXD4L1Q9NU39 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
FOXD4L1Q9NU39 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5□□□□□ -1.61
FOXD4L1Q9NU39 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 SNORA60-201ENST00000362396 134 ntBASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 RN7SL481P-201ENST00000477764 299 ntBASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 MIR8055-201ENST00000610739 97 ntBASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD4L1Q9NU39 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 RNA5SP443-201ENST00000363083 132 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 SNORA70F-201ENST00000384142 135 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 MIR1236-201ENST00000408340 102 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 CST9LP2-201ENST00000437612 320 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 AC006463.2-201ENST00000473326 348 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 RPS29P19-201ENST00000479709 171 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 AC006483.1-201ENST00000487308 313 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 RNU7-137P-201ENST00000516788 62 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 XIST_intron.1-201ENST00000619444 68 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 MIR8065-201ENST00000620577 100 ntBASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXD4L1Q9NU39 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 RNU6-1094P-201ENST00000362416 104 ntBASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 RPS26P15-201ENST00000488067 348 ntBASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
FOXD4L1Q9NU39 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.96□□□□□ -1.62
FOXD4L1Q9NU39 RNU1-18P-201ENST00000363062 164 ntBASIC4.96□□□□□ -1.62
FOXD4L1Q9NU39 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXD4L1Q9NU39 AC114801.3-201ENST00000510231 177 ntBASIC4.96□□□□□ -1.62
FOXD4L1Q9NU39 RPL12P50-201ENST00000603116 116 ntBASIC4.96□□□□□ -1.62
FOXD4L1Q9NU39 AP001362.1-201ENST00000625165 124 ntBASIC4.96□□□□□ -1.62
FOXD4L1Q9NU39 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXD4L1Q9NU39 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
FOXD4L1Q9NU39 SNORA56-201ENST00000383966 129 ntBASIC4.95□□□□□ -1.62
FOXD4L1Q9NU39 SNORA3C-201ENST00000408792 125 ntBASIC4.95□□□□□ -1.62
FOXD4L1Q9NU39 RPL23AP6-201ENST00000446637 472 ntBASIC4.95□□□□□ -1.62
FOXD4L1Q9NU39 SNORA70.14-201ENST00000516205 110 ntBASIC4.95□□□□□ -1.62
FOXD4L1Q9NU39 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXD4L1Q9NU39 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
FOXD4L1Q9NU39 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms