Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ATG3Q9NT62 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATG3Q9NT62 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.38□□□□□ -1.87
ATG3Q9NT62 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ATG3Q9NT62 Y_RNA.52-201ENST00000362760 96 ntBASIC3.38□□□□□ -1.87
ATG3Q9NT62 RNU6-655P-201ENST00000362858 107 ntBASIC3.38□□□□□ -1.87
ATG3Q9NT62 SNORD18B-201ENST00000365659 72 ntBASIC3.38□□□□□ -1.87
ATG3Q9NT62 MIR147B-201ENST00000390185 80 ntBASIC3.38□□□□□ -1.87
ATG3Q9NT62 SNORA12.1-201ENST00000390873 148 ntBASIC3.38□□□□□ -1.87
ATG3Q9NT62 AL513477.1-202ENST00000417061 214 ntBASIC3.38□□□□□ -1.87
ATG3Q9NT62 SNORA9.3-201ENST00000516383 129 ntBASIC3.38□□□□□ -1.87
ATG3Q9NT62 RN7SKP282-201ENST00000516824 299 ntBASIC3.38□□□□□ -1.87
ATG3Q9NT62 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
ATG3Q9NT62 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.38□□□□□ -1.87
ATG3Q9NT62 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATG3Q9NT62 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATG3Q9NT62 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATG3Q9NT62 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATG3Q9NT62 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
ATG3Q9NT62 AL159152.1-201ENST00000635019 2587 ntBASIC3.37□□□□□ -1.87
ATG3Q9NT62 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
ATG3Q9NT62 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
ATG3Q9NT62 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG3Q9NT62 U8.2-201ENST00000363156 134 ntBASIC3.37□□□□□ -1.87
ATG3Q9NT62 SNORD32B-201ENST00000364460 84 ntBASIC3.37□□□□□ -1.87
ATG3Q9NT62 RNU6-294P-201ENST00000364999 102 ntBASIC3.37□□□□□ -1.87
ATG3Q9NT62 RNU6-49P-201ENST00000384256 107 ntBASIC3.37□□□□□ -1.87
ATG3Q9NT62 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.37□□□□□ -1.87
ATG3Q9NT62 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.37□□□□□ -1.87
ATG3Q9NT62 HMGN2P32-201ENST00000444648 269 ntBASIC3.37□□□□□ -1.87
ATG3Q9NT62 RNU6-762P-201ENST00000517107 102 ntBASIC3.37□□□□□ -1.87
ATG3Q9NT62 AC097639.2-201ENST00000603159 172 ntBASIC3.37□□□□□ -1.87
ATG3Q9NT62 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
ATG3Q9NT62 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.37□□□□□ -1.87
ATG3Q9NT62 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATG3Q9NT62 AL596211.1-201ENST00000569873 2277 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 Y_RNA.281-201ENST00000364774 94 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 RNU6-1107P-201ENST00000364817 104 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 RNU6-1083P-201ENST00000384022 107 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 RNU2-70P-201ENST00000410718 179 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 Z98742.3-201ENST00000418637 326 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 Z96811.1-201ENST00000445880 108 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 snoU13.15-201ENST00000459407 104 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 snoU13.26-201ENST00000459452 105 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 RNU7-57P-201ENST00000459540 60 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 AC112771.1-201ENST00000463581 102 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.36□□□□□ -1.87
ATG3Q9NT62 RNA5SP20-201ENST00000515976 84 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 SNORD77.4-201ENST00000516158 81 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 RNA5SP153-201ENST00000516498 76 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.36□□□□□ -1.87
ATG3Q9NT62 PRELID2P1-201ENST00000552837 301 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 AC015720.1-201ENST00000565251 277 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 uc_338.14-201ENST00000613162 166 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 uc_338.4-201ENST00000616635 176 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.36□□□□□ -1.87
ATG3Q9NT62 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.36□□□□□ -1.87
ATG3Q9NT62 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
ATG3Q9NT62 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.35□□□□□ -1.87
ATG3Q9NT62 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG3Q9NT62 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATG3Q9NT62 RNU6-1131P-201ENST00000364955 107 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 SNORA51.10-201ENST00000384418 136 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 Y_RNA.549-201ENST00000384657 102 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 MIR27B-201ENST00000385129 97 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 MIR891A-201ENST00000401237 79 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 MIR1263-201ENST00000408324 86 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 AL441985.1-201ENST00000457727 251 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 AC010531.2-201ENST00000465012 153 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 RPS29P21-201ENST00000496272 170 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 AC010598.1-201ENST00000510378 103 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 MIR449C-201ENST00000516047 92 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 RNU6-56P-201ENST00000516986 93 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 AP001318.4-201ENST00000616637 121 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 MIR7843-201ENST00000622274 79 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.35□□□□□ -1.87
ATG3Q9NT62 AC108206.1-201ENST00000570186 4159 ntBASIC3.34□□□□□ -1.87
ATG3Q9NT62 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
ATG3Q9NT62 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATG3Q9NT62 RNU1-57P-201ENST00000384491 166 ntBASIC3.34□□□□□ -1.87
ATG3Q9NT62 AL590004.2-201ENST00000404787 371 ntBASIC3.34□□□□□ -1.87
ATG3Q9NT62 RNU6-1328P-201ENST00000410938 106 ntBASIC3.34□□□□□ -1.87
ATG3Q9NT62 RNU6-237P-201ENST00000515985 71 ntBASIC3.34□□□□□ -1.87
ATG3Q9NT62 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG3Q9NT62 RPL23AP91-201ENST00000569211 455 ntBASIC3.34□□□□□ -1.87
ATG3Q9NT62 MIR4635-201ENST00000583759 79 ntBASIC3.34□□□□□ -1.87
ATG3Q9NT62 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.33□□□□□ -1.88
ATG3Q9NT62 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATG3Q9NT62 Y_RNA.328-201ENST00000365208 113 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 RNU6-117P-201ENST00000365415 107 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 SNORA26.2-201ENST00000390922 122 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 SNORD72-201ENST00000390994 80 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 RNU4-53P-201ENST00000410828 140 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 AC016717.1-201ENST00000448918 286 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 SNORD11-201ENST00000459124 84 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 AC026241.1-201ENST00000517873 2142 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 AC007751.1-201ENST00000529260 376 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 AC009831.4-201ENST00000620744 325 ntBASIC3.33□□□□□ -1.88
ATG3Q9NT62 U4.3-201ENST00000621047 82 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms