Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC108210.2-201ENST00000503681 201 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 SNORD111.1-201ENST00000516421 86 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 RNU6-875P-201ENST00000516488 106 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCL28Q9NRJ3 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.263-201ENST00000364659 114 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 MIR452-201ENST00000385020 85 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 RNU6-1009P-201ENST00000390996 107 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AC005042.3-201ENST00000453230 174 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 LINC01399-202ENST00000458450 244 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 OR2A41P-201ENST00000473586 105 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AC087343.1-201ENST00000477341 475 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AC114811.1-201ENST00000507207 168 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 MIR4423-201ENST00000580922 80 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 FAM106DP-201ENST00000586416 501 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 RBM11P1-201ENST00000604951 799 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 MIR6078-201ENST00000611069 100 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AC010205.1-201ENST00000616668 449 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AL138825.1-201ENST00000618587 192 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AC091925.1-201ENST00000623204 462 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 AL008636.1-201ENST00000625038 1018 ntBASIC0.81□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.496-201ENST00000384444 101 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 AL390729.2-201ENST00000416137 156 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 AP1B1P2-201ENST00000416196 106 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 MCFD2P1-201ENST00000417812 300 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 BTF3P4-201ENST00000418852 495 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 RPS20P10-201ENST00000451209 253 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 U8.19-201ENST00000459095 133 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 SNORA25.10-201ENST00000515926 124 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 SNORD79.1-201ENST00000516069 84 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 AC015712.3-201ENST00000559380 164 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 AC005972.2-201ENST00000604690 348 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 AL353997.5-201ENST00000618886 171 ntBASIC0.8□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.252-201ENST00000364556 101 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 RNU1-115P-201ENST00000365329 160 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 SNORA72-201ENST00000384339 132 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.529-201ENST00000384586 119 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 RNU6-710P-201ENST00000410424 105 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 AC236972.2-201ENST00000434979 310 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 AC093027.1-201ENST00000546698 429 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 MIR4801-201ENST00000582704 82 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 AC092447.9-201ENST00000603395 144 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 AL096861.1-201ENST00000610899 123 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
CCL28Q9NRJ3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.356-201ENST00000365475 113 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.462-201ENST00000384268 102 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 SNORA80D-201ENST00000384488 135 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 MIR522-201ENST00000385071 87 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 RNU6-855P-201ENST00000410395 104 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 MTND5P20-201ENST00000448677 143 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 snoU13.23-201ENST00000458863 104 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.661-201ENST00000516003 99 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 RNU6-976P-201ENST00000516086 111 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 RNU4-77P-201ENST00000516692 156 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 MIR5188-201ENST00000583467 113 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 HSPE1P19-201ENST00000603327 295 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 Y_RNA.772-201ENST00000606692 102 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 AC104985.2-201ENST00000620598 500 ntBASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CCL28Q9NRJ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.78□□□□□ -2.29
CCL28Q9NRJ3 MIR1298-201ENST00000408783 112 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AF228730.4-201ENST00000421457 183 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AL160004.2-201ENST00000432935 350 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AC245047.8-201ENST00000456455 284 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 HMGN1P7-201ENST00000491722 313 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 SNORA40.14-201ENST00000516543 86 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.702-201ENST00000516843 96 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 MIR548S-201ENST00000581352 82 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 RPS29P30-201ENST00000600975 111 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AL121655.1-201ENST00000605811 308 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms