Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HPS4Q9NQG7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HPS4Q9NQG7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HPS4Q9NQG7 RNU6-20P-201ENST00000384106 107 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 AL034345.1-201ENST00000407768 123 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 RNA5SP475-201ENST00000410568 110 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 MTCO2P12-201ENST00000427426 682 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.24□□□□□ -2.21
HPS4Q9NQG7 PGBD4P5-201ENST00000445958 426 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 Y_RNA.631-201ENST00000459607 101 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 SNORA40.14-201ENST00000516543 86 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 RNU7-172P-201ENST00000517125 64 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HPS4Q9NQG7 MIR3684-201ENST00000579779 74 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.24□□□□□ -2.21
HPS4Q9NQG7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.24□□□□□ -2.21
HPS4Q9NQG7 RNU6-626P-201ENST00000363354 107 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 RNU6-407P-201ENST00000365280 104 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 Y_RNA.645-201ENST00000391229 102 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 AL354751.2-201ENST00000415471 210 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 RNU6-1153P-201ENST00000516760 105 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 RNU2-12P-201ENST00000517216 168 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 AC040926.1-201ENST00000530195 238 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 AC020661.2-201ENST00000560114 134 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 AL162424.1-201ENST00000602325 221 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 PART1_1.1-201ENST00000611761 217 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 RMST_2.1-201ENST00000617263 136 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 MIR6079-201ENST00000635807 62 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
HPS4Q9NQG7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
HPS4Q9NQG7 AC005592.1-201ENST00000566527 1640 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 SNORA27.1-201ENST00000362604 124 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 SNORD115-30-201ENST00000364117 82 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 RNU6-450P-201ENST00000364654 107 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 Y_RNA.458-201ENST00000384240 102 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 MIR548P-201ENST00000408336 84 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 RNU6-130P-201ENST00000411112 103 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 RNU6-1199P-201ENST00000411249 104 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 RNA5SP20-201ENST00000515976 84 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 MIR3664-201ENST00000579074 99 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AC005176.2-201ENST00000596933 147 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 HSPE1P19-201ENST00000603327 295 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AC005828.6-201ENST00000606610 232 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AC073349.3-201ENST00000617616 186 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AL138825.1-201ENST00000618587 192 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AL513423.1-201ENST00000621695 132 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.22□□□□□ -2.21
HPS4Q9NQG7 AC134503.1-201ENST00000633048 54 ntBASIC1.22□□□□□ -2.21
HPS4Q9NQG7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.28-201ENST00000362554 111 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.128-201ENST00000363391 112 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.243-201ENST00000364481 109 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 SNORA22B-201ENST00000383876 138 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
HPS4Q9NQG7 MIR1302-11-201ENST00000408051 138 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 MIR1302-9-201ENST00000408365 138 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 MIR1302-10-201ENST00000408734 138 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
HPS4Q9NQG7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.21□□□□□ -2.22
HPS4Q9NQG7 RPEP5-201ENST00000441137 268 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.21□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.701-201ENST00000516812 110 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.711-201ENST00000516993 102 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 RPL21P9-201ENST00000556149 474 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 MIR3171-201ENST00000584270 74 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 RPS29P30-201ENST00000600975 111 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 MIR1302-2-201ENST00000607096 138 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 SNORD3E-202ENST00000627253 216 ntBASIC1.21□□□□□ -2.22
HPS4Q9NQG7 SNORD14.1-201ENST00000365609 90 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RNU6-1310P-201ENST00000384153 107 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.446-201ENST00000384178 104 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.471-201ENST00000384312 102 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RNU11-5P-201ENST00000391216 129 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RNU2-54P-201ENST00000410299 190 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 STAG3L5P-204ENST00000443759 179 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RPL39P38-201ENST00000467018 153 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 AC091021.1-201ENST00000468051 388 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 SNORA25.10-201ENST00000515926 124 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RNU6-475P-201ENST00000516073 104 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RNU6-155P-201ENST00000516347 100 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RNU6-63P-201ENST00000516690 95 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.2□□□□□ -2.22
HPS4Q9NQG7 AC091178.2-201ENST00000584401 117 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 AC104695.3-201ENST00000604052 296 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 SNORA28-201ENST00000606769 126 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 AC010205.1-201ENST00000616668 449 ntBASIC1.2□□□□□ -2.22
HPS4Q9NQG7 RNA5SP327-201ENST00000362494 101 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 RNU6-1175P-201ENST00000365200 107 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.361-201ENST00000365515 120 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.19□□□□□ -2.22
HPS4Q9NQG7 RNU6-937P-201ENST00000384325 106 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.570-201ENST00000384750 101 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms