Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-461P-201ENST00000364195 107 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 RNU1-132P-201ENST00000364300 164 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 Y_RNA.333-201ENST00000365274 102 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 RNU6-53P-201ENST00000365367 106 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 RNA5SP151-201ENST00000365632 117 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 MIR592-201ENST00000384959 97 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 MIR519A1-201ENST00000385257 85 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 RNU6-696P-201ENST00000390834 107 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 TRAJ51-201ENST00000504127 63 ntBASIC4.83□□□□□ -1.64
RNF39Q9H2S5 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
RNF39Q9H2S5 ZNF355P-201ENST00000427301 3216 ntBASIC4.82□□□□□ -1.64
RNF39Q9H2S5 AP001273.1-201ENST00000624493 3152 ntBASIC4.82□□□□□ -1.64
RNF39Q9H2S5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF39Q9H2S5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF39Q9H2S5 RNU1-105P-201ENST00000363470 161 ntBASIC4.82□□□□□ -1.64
RNF39Q9H2S5 AC011998.1-201ENST00000433403 117 ntBASIC4.82□□□□□ -1.64
RNF39Q9H2S5 SCARNA17.1-201ENST00000516211 143 ntBASIC4.82□□□□□ -1.64
RNF39Q9H2S5 SCARNA17.2-201ENST00000516334 143 ntBASIC4.82□□□□□ -1.64
RNF39Q9H2S5 SCARNA17.4-201ENST00000614296 143 ntBASIC4.82□□□□□ -1.64
RNF39Q9H2S5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF39Q9H2S5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF39Q9H2S5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF39Q9H2S5 GABRG2-229ENST00000641017 3628 ntBASIC4.82□□□□□ -1.64
RNF39Q9H2S5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
RNF39Q9H2S5 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF39Q9H2S5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 U3.27-201ENST00000391237 200 ntBASIC4.81□□□□□ -1.64
RNF39Q9H2S5 SNORD75.2-201ENST00000408784 58 ntBASIC4.81□□□□□ -1.64
RNF39Q9H2S5 RNU6-1054P-201ENST00000411293 104 ntBASIC4.81□□□□□ -1.64
RNF39Q9H2S5 Z74021.1-201ENST00000423610 407 ntBASIC4.81□□□□□ -1.64
RNF39Q9H2S5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 AC068724.3-201ENST00000625906 87 ntBASIC4.81□□□□□ -1.64
RNF39Q9H2S5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF39Q9H2S5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF39Q9H2S5 SNORA31-201ENST00000362607 130 ntBASIC4.8□□□□□ -1.64
RNF39Q9H2S5 Y_RNA.536-201ENST00000384621 113 ntBASIC4.8□□□□□ -1.64
RNF39Q9H2S5 RNA5SP446-201ENST00000515955 82 ntBASIC4.8□□□□□ -1.64
RNF39Q9H2S5 AC005786.1-201ENST00000588553 154 ntBASIC4.8□□□□□ -1.64
RNF39Q9H2S5 AC113403.1-201ENST00000604910 193 ntBASIC4.8□□□□□ -1.64
RNF39Q9H2S5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RNF39Q9H2S5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF39Q9H2S5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF39Q9H2S5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RNF39Q9H2S5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF39Q9H2S5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF39Q9H2S5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF39Q9H2S5 RNA5SP366-201ENST00000365454 123 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 MIR203A-201ENST00000384836 110 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 MIR588-201ENST00000384900 83 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 MIR630-201ENST00000384957 97 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 MIR218-1-201ENST00000384999 110 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF39Q9H2S5 RPL23AP42-201ENST00000471152 471 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 GTF3AP2-201ENST00000557014 266 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 MIR1254-2-201ENST00000579553 63 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 MIR3653-201ENST00000625572 110 ntBASIC4.79□□□□□ -1.64
RNF39Q9H2S5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
RNF39Q9H2S5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF39Q9H2S5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF39Q9H2S5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF39Q9H2S5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF39Q9H2S5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF39Q9H2S5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNF39Q9H2S5 SNORA11F-201ENST00000408237 128 ntBASIC4.78□□□□□ -1.64
RNF39Q9H2S5 HMGN2P27-201ENST00000427352 270 ntBASIC4.78□□□□□ -1.64
RNF39Q9H2S5 SNORA9.3-201ENST00000516383 129 ntBASIC4.78□□□□□ -1.64
RNF39Q9H2S5 SNORA31.9-201ENST00000516429 84 ntBASIC4.78□□□□□ -1.64
RNF39Q9H2S5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF39Q9H2S5 MIR548X-201ENST00000580069 75 ntBASIC4.78□□□□□ -1.64
RNF39Q9H2S5 RNU7-10P-201ENST00000607194 63 ntBASIC4.78□□□□□ -1.64
RNF39Q9H2S5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RNF39Q9H2S5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF39Q9H2S5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RNF39Q9H2S5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF39Q9H2S5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF39Q9H2S5 AL139132.1-201ENST00000431587 344 ntBASIC4.77□□□□□ -1.65
RNF39Q9H2S5 AC091153.1-201ENST00000466297 402 ntBASIC4.77□□□□□ -1.65
RNF39Q9H2S5 RNA5SP497-201ENST00000516081 97 ntBASIC4.77□□□□□ -1.65
RNF39Q9H2S5 RN7SL176P-201ENST00000580352 264 ntBASIC4.77□□□□□ -1.65
RNF39Q9H2S5 MIR3935-201ENST00000583472 104 ntBASIC4.77□□□□□ -1.65
RNF39Q9H2S5 AC091178.1-203ENST00000584586 279 ntBASIC4.77□□□□□ -1.65
RNF39Q9H2S5 MIR8069-1-201ENST00000616627 86 ntBASIC4.77□□□□□ -1.65
RNF39Q9H2S5 MIR8069-2-201ENST00000621412 86 ntBASIC4.77□□□□□ -1.65
RNF39Q9H2S5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF39Q9H2S5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF39Q9H2S5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF39Q9H2S5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms