Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AC018630.2-201ENST00000534866 2403 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.124-201ENST00000363339 93 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.158-201ENST00000363651 101 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 RNA5SP109-201ENST00000391010 116 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 AL031003.1-201ENST00000404229 172 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-1199P-201ENST00000411249 104 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 COX6CP10-201ENST00000416832 224 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 RPS27P1-201ENST00000450552 247 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 AC005042.3-201ENST00000453230 174 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.715-201ENST00000517082 110 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 AC022217.4-201ENST00000604389 163 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 MIR8074-201ENST00000615081 81 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 AC127459.3-201ENST00000624328 466 ntBASIC1.58□□□□□ -2.16
PCDH11YQ9BZA8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-324P-201ENST00000363957 106 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.380-201ENST00000365663 111 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-439P-201ENST00000384188 106 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 MIR1252-201ENST00000408861 65 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 HSPE1P13-201ENST00000451143 297 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 MIR4709-201ENST00000577272 72 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 AC016925.2-201ENST00000605108 242 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 AC011373.1-201ENST00000607270 237 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 AL021879.1-201ENST00000611756 288 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 PART1_1.1-201ENST00000611761 217 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 MIR6079-201ENST00000635807 62 ntBASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.143-201ENST00000363520 106 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.216-201ENST00000364205 93 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 SNORA4.2-201ENST00000365313 147 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-505P-201ENST00000384427 107 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-376P-201ENST00000384731 106 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 MIR520E-201ENST00000384867 87 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 MIR562-201ENST00000384894 95 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 AC245047.3-201ENST00000429428 127 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 AL606517.2-201ENST00000442855 241 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-436P-201ENST00000516171 114 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 RNU7-110P-201ENST00000516891 62 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 MIR3198-2-201ENST00000577868 80 ntBASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-450P-201ENST00000364654 107 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.331-201ENST00000365267 102 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-117P-201ENST00000365415 107 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-937P-201ENST00000384325 106 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-21P-201ENST00000384710 107 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 MIR222-201ENST00000384992 110 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 RNU2-61P-201ENST00000411069 191 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-130P-201ENST00000411112 103 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 JTBP1-201ENST00000441314 247 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-1153P-201ENST00000516760 105 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 FAM106DP-201ENST00000586416 501 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 MIR8054-201ENST00000620877 86 ntBASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.55□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.183-201ENST00000363882 113 ntBASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.455-201ENST00000384230 98 ntBASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-710P-201ENST00000410424 105 ntBASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 RN7SKP200-201ENST00000410564 320 ntBASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 RNU7-34P-201ENST00000459394 64 ntBASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 RPS29P1-201ENST00000465274 159 ntBASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-966P-201ENST00000516479 104 ntBASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.54□□□□□ -2.16
PCDH11YQ9BZA8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 SNORA33.2-201ENST00000365413 134 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 MIR520G-201ENST00000385064 90 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-440P-201ENST00000390882 105 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 SEPT14P8-201ENST00000508026 178 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 SNORA31.10-201ENST00000516482 106 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-1337P-201ENST00000516525 95 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 RNU6-341P-201ENST00000516973 96 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 MIR4680-201ENST00000580906 66 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 AC091178.2-201ENST00000584401 117 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 AL929325.1-201ENST00000603096 117 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 RAC1P9-201ENST00000604990 392 ntBASIC1.53□□□□□ -2.16
PCDH11YQ9BZA8 Y_RNA.329-201ENST00000365209 107 ntBASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 RNU6-639P-201ENST00000384074 107 ntBASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 HSPE1P21-201ENST00000438283 308 ntBASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 AC091021.1-201ENST00000468051 388 ntBASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 RNU6-397P-201ENST00000516226 104 ntBASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 RNU6-63P-201ENST00000516690 95 ntBASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 AC136932.1-201ENST00000574771 208 ntBASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 MIR151B-201ENST00000584249 96 ntBASIC1.52□□□□□ -2.17
PCDH11YQ9BZA8 AL162424.1-201ENST00000602325 221 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms