Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 CEP170P1-201ENST00000502249 4587 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR202-201ENST00000362219 110 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR30D-201ENST00000362283 70 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 Y_RNA.129-201ENST00000363392 110 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA63.6-201ENST00000364921 119 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 Y_RNA.320-201ENST00000365144 102 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA8-201ENST00000384574 139 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR363-201ENST00000384840 75 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR515-2-201ENST00000384883 83 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR515-1-201ENST00000384884 83 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 Z74021.1-201ENST00000423610 407 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 RPEP3-201ENST00000425462 676 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 AC245884.2-201ENST00000426257 404 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 AL161651.1-201ENST00000440882 223 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 snoU13.20-201ENST00000459180 104 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 AC084357.1-201ENST00000473404 255 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SL297P-201ENST00000483161 293 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 AC138907.6-201ENST00000568401 126 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 AC138869.1-201ENST00000568623 124 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 AC244505.7-201ENST00000599675 272 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 AC245014.3-201ENST00000618589 347 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR338-201ENST00000636369 67 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR4302-201ENST00000638058 60 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 LINC01355-201ENST00000566551 5444 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 Z95331.1-201ENST00000623075 23112 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 SMG1P4-204ENST00000523028 4131 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA27.2-201ENST00000363365 126 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SKP280-201ENST00000364196 304 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 RNA5SP387-201ENST00000364226 106 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 RNA5SP500-201ENST00000364486 119 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR617-201ENST00000385030 97 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR125B2-201ENST00000385128 89 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR656-201ENST00000385224 78 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR758-201ENST00000390227 88 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA17.3-201ENST00000391159 129 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 SRIP3-201ENST00000413200 219 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 AL441985.1-201ENST00000457727 251 ntBASIC1.05□□□□□ -2.24
KRTAP4-4Q9BYR3 AC067940.1-201ENST00000458411 300 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms