Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC007536.1-201ENST00000533382 349 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 U2.20-201ENST00000613956 192 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 AC093831.2-201ENST00000624393 3427 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 AC008264.2-201ENST00000610193 3731 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 RNU1-72P-201ENST00000362976 153 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 RNU6-743P-201ENST00000364151 106 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 RNU1-96P-201ENST00000364163 162 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 RNU6-1014P-201ENST00000383940 103 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.549-201ENST00000384657 102 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 MIR759-201ENST00000390224 91 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 SNORA12.1-201ENST00000390873 148 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 RNU1-101P-201ENST00000391171 127 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 RNU2-32P-201ENST00000411193 191 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 AC123900.1-201ENST00000420390 96 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 RPS12P18-201ENST00000442381 270 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 AC107016.2-201ENST00000547968 190 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 AC007229.1-201ENST00000590455 412 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 AL365361.1-201ENST00000566942 3481 ntBASIC2.51□□□□□ -2.01
SSBP3Q9BWW4 AC091564.4-201ENST00000533934 2194 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 SNORA63.5-201ENST00000363548 123 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 RNU6-640P-201ENST00000363693 105 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.558-201ENST00000384685 113 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 SNORA26.2-201ENST00000390922 122 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 RNA5SP274-201ENST00000410484 108 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 RNA5SP344-201ENST00000411081 104 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 EDDM3CP-201ENST00000415977 425 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 COTL1P1-201ENST00000422309 375 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 AC244505.4-201ENST00000434905 287 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 SSXP5-201ENST00000443473 287 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 RPL39P34-201ENST00000477141 156 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 CKS1BP2-201ENST00000497342 240 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 AC011406.1-201ENST00000512440 370 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.666-201ENST00000516187 112 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 RNU7-99P-201ENST00000516271 62 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 RNU6-970P-201ENST00000516312 107 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 RNU6-856P-201ENST00000516959 98 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 AC022217.4-201ENST00000604389 163 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 MIR5739-201ENST00000619803 80 ntBASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SSBP3Q9BWW4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 AC018630.2-201ENST00000534866 2403 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 RNY4P6-201ENST00000363667 96 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.198-201ENST00000364013 98 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 U8.9-201ENST00000365667 134 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 SNORA44-201ENST00000384584 132 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.544-201ENST00000384650 113 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 SNORD77.3-201ENST00000391113 65 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 SNRPGP13-201ENST00000442212 177 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 UQCRHP3-201ENST00000451503 251 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 AC093259.1-201ENST00000509755 300 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 AC008507.4-201ENST00000585464 127 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 AC087685.1-201ENST00000587507 141 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 MIR7157-201ENST00000635801 60 ntBASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
SSBP3Q9BWW4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 AC108206.1-201ENST00000570186 4159 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.213-201ENST00000364178 111 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 RNU6-1131P-201ENST00000364955 107 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 SNORA46-201ENST00000384762 135 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 MIR218-1-201ENST00000384999 110 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 MIR634-201ENST00000385208 97 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 MIR802-201ENST00000390235 94 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 AC104332.2-201ENST00000429959 156 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 AL161788.1-201ENST00000441805 169 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 SCARNA15-202ENST00000516881 127 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 SCARNA3-201ENST00000517097 143 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 RNU6-94P-201ENST00000607728 107 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 AC006386.2-201ENST00000624491 75 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 AC012005.1-201ENST00000624575 75 ntBASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SSBP3Q9BWW4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SSBP3Q9BWW4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SSBP3Q9BWW4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSBP3Q9BWW4 AC073325.2-201ENST00000339545 159 ntBASIC2.47□□□□□ -2.01
SSBP3Q9BWW4 RNA5SP139-201ENST00000364340 117 ntBASIC2.47□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.47□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.323-201ENST00000365157 109 ntBASIC2.47□□□□□ -2.01
SSBP3Q9BWW4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.47□□□□□ -2.01
SSBP3Q9BWW4 SNORA9.2-201ENST00000365361 133 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms