Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 MTCO1P44-201ENST00000441935 243 ntBASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 AC074290.1-201ENST00000448883 135 ntBASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 AC010531.2-201ENST00000465012 153 ntBASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 RNU6-948P-201ENST00000516374 107 ntBASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 RNU6-1337P-201ENST00000516525 95 ntBASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 RNU6-63P-201ENST00000516690 95 ntBASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SH2D3AQ9BRG2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 MIRLET7G-201ENST00000362280 84 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 SNORA48.3-201ENST00000391081 134 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 AC003685.2-201ENST00000422795 395 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 HMGN2P18-201ENST00000450680 270 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 CKS1BP2-201ENST00000497342 240 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 Y_RNA.797-201ENST00000515977 94 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 AC109810.1-201ENST00000534066 224 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 MIR3117-201ENST00000584034 78 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 MIR4769-201ENST00000584126 77 ntBASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.28□□□□□ -2.04
SH2D3AQ9BRG2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.24-201ENST00000362508 103 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.357-201ENST00000365487 109 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-969P-201ENST00000383900 105 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-443P-201ENST00000384780 107 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 MT-TT-201ENST00000387460 66 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-131P-201ENST00000391144 107 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNU2-63P-201ENST00000410792 194 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-383P-201ENST00000410864 94 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 CYCSP49-201ENST00000420810 319 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 RNA5SP490-201ENST00000517141 136 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 MIR548AY-201ENST00000617669 107 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.778-201ENST00000620203 90 ntBASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
SH2D3AQ9BRG2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 MIR340-201ENST00000362125 95 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-674P-201ENST00000363831 107 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.215-201ENST00000364204 112 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.229-201ENST00000364347 113 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 RNA5SP125-201ENST00000364843 120 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 RNA5SP160-201ENST00000364866 120 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-418P-201ENST00000384035 107 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-1228P-201ENST00000391014 107 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 RNU4-43P-201ENST00000410628 137 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-57P-201ENST00000411348 103 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 AL162725.1-201ENST00000435405 301 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 AC245047.8-201ENST00000456455 284 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 AC018868.1-201ENST00000491307 315 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 AC093259.1-201ENST00000509755 300 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-561P-201ENST00000516222 102 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 AC127455.1-201ENST00000565496 145 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 AL355297.2-201ENST00000604792 129 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SH2D3AQ9BRG2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-438P-201ENST00000365561 103 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 RNY3P5-201ENST00000384127 102 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-376P-201ENST00000384731 106 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 MIR569-201ENST00000385228 96 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 SNORA36B-201ENST00000410438 131 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 AC008134.1-201ENST00000420943 193 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 AL357134.1-201ENST00000445848 426 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 RNA5SP20-201ENST00000515976 84 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 SNORD116-25-201ENST00000516517 92 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 RNU7-116P-201ENST00000516940 62 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 MIR4724-201ENST00000579485 89 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 MIR5089-201ENST00000580047 84 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 AC005972.2-201ENST00000604690 348 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 AL021707.8-201ENST00000609428 183 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 MIR3658-201ENST00000636291 56 ntBASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SH2D3AQ9BRG2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SH2D3AQ9BRG2 AL356292.1-201ENST00000283110 373 ntBASIC2.24□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.488-201ENST00000384403 102 ntBASIC2.24□□□□□ -2.05
SH2D3AQ9BRG2 RNU6-136P-201ENST00000384663 107 ntBASIC2.24□□□□□ -2.05
SH2D3AQ9BRG2 Y_RNA.586-201ENST00000391146 98 ntBASIC2.24□□□□□ -2.05
SH2D3AQ9BRG2 RN7SKP101-201ENST00000411376 320 ntBASIC2.24□□□□□ -2.05
SH2D3AQ9BRG2 AL137159.1-201ENST00000452808 512 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms