Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 Y_RNA.508-201ENST00000384502 114 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.574-201ENST00000384766 95 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 MIR499A-201ENST00000384903 122 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 COX6CP10-201ENST00000416832 224 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 RPL21P38-201ENST00000418090 167 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 U8.19-201ENST00000459095 133 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-1337P-201ENST00000516525 95 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 SNORA44.1-201ENST00000517031 108 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 RNU7-128P-201ENST00000517247 62 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 AL162424.1-201ENST00000602325 221 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 MIR6079-201ENST00000635807 62 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.136-201ENST00000363444 102 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.286-201ENST00000364813 102 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-117P-201ENST00000365415 107 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-514P-201ENST00000384208 107 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 MIR215-201ENST00000384858 110 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-855P-201ENST00000410395 104 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-321P-201ENST00000410912 106 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 HMGN1P10-201ENST00000474557 553 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 AL358944.1-201ENST00000528537 144 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 AC022254.1-201ENST00000567857 235 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 AL162730.1-201ENST00000605734 292 ntBASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-661P-201ENST00000362409 107 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.47-201ENST00000362697 108 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 snoU2_19.2-201ENST00000363024 80 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.368-201ENST00000365547 113 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-102P-201ENST00000384485 104 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 MIR568-201ENST00000385036 95 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 SNORA67.5-201ENST00000391036 107 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 MIR1302-3-201ENST00000408128 138 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 RN7SKP200-201ENST00000410564 320 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 MTND3P2-201ENST00000438452 342 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 HSPE1P25-201ENST00000455484 251 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 SNORA31.17-201ENST00000516953 127 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 RNU2-31P-201ENST00000516954 155 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-341P-201ENST00000516973 96 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 DEFB117-201ENST00000602356 141 ntBASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLSTN3Q9BQT9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.341-201ENST00000365341 102 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 MIR1302-6-201ENST00000408466 90 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 BTF3P4-201ENST00000418852 495 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 AC245047.3-201ENST00000429428 127 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 AL162725.1-201ENST00000435405 301 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 HSPE1P9-201ENST00000440046 311 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 TRMT112P2-201ENST00000512910 132 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 MTCO2P24-201ENST00000515611 426 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 RNU7-28P-201ENST00000516759 62 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 RNU7-116P-201ENST00000516940 62 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 AP002004.2-201ENST00000531656 154 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 AL512605.2-201ENST00000592972 256 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 AC005972.2-201ENST00000604690 348 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 AL359821.1-201ENST00000605519 182 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 SNORA28-201ENST00000606769 126 ntBASIC1.84□□□□□ -2.11
CLSTN3Q9BQT9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.84□□□□□ -2.12
CLSTN3Q9BQT9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 SNORA25.1-201ENST00000362326 128 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-414P-201ENST00000363705 104 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.556-201ENST00000384677 113 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 RNU4-62P-201ENST00000410125 130 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 MTCYBP9-201ENST00000431021 303 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 MIR4709-201ENST00000577272 72 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 MIR4303-201ENST00000581299 66 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 MIR8062-201ENST00000621515 85 ntBASIC1.83□□□□□ -2.12
CLSTN3Q9BQT9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.84-201ENST00000363011 104 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.376-201ENST00000365638 108 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 RPS20P10-201ENST00000451209 253 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 TRBVB-201ENST00000477100 408 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 RNU2-56P-201ENST00000516826 190 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-570P-201ENST00000517051 105 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 RNA5SP437-201ENST00000517249 129 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 AC022217.4-201ENST00000604389 163 ntBASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.82□□□□□ -2.12
CLSTN3Q9BQT9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.541-201ENST00000384640 113 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 AL034345.1-201ENST00000407768 123 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms