Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 SNORD68-201ENST00000363214 84 ntBASIC-2.47□□□□□ -2.8
VPS13AQ96RL7 SNORD115-34-201ENST00000362441 82 ntBASIC-2.47□□□□□ -2.81
VPS13AQ96RL7 RNU2-11P-201ENST00000459191 187 ntBASIC-2.47□□□□□ -2.81
VPS13AQ96RL7 Z97988.1-201ENST00000637697 135 ntBASIC-2.47□□□□□ -2.81
VPS13AQ96RL7 MTND4P21-201ENST00000453886 1357 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.42-201ENST00000362660 108 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 SNORA32.2-201ENST00000384049 122 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 RNU2-23P-201ENST00000410545 195 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 SEPT14P24-201ENST00000447236 180 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 SEPT14P4-201ENST00000513445 186 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 AL356055.1-201ENST00000602528 446 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 AC073648.5-201ENST00000603502 305 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 SGO1P1-201ENST00000603525 1447 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 RNU6-695P-201ENST00000391157 104 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 RNU6-397P-201ENST00000516226 104 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 AC012531.4-201ENST00000616509 177 ntBASIC-2.48□□□□□ -2.81
VPS13AQ96RL7 MIR4473-201ENST00000583731 91 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 AC021851.1-201ENST00000608537 1082 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 SNORD115-15-201ENST00000364809 81 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 RPL22P17-201ENST00000438729 315 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 AC005592.1-201ENST00000566527 1640 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.265-201ENST00000364677 108 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 FGF7P6-202ENST00000451282 293 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 AC093783.1-201ENST00000612976 329 ntBASIC-2.49□□□□□ -2.81
VPS13AQ96RL7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 AC010153.1-201ENST00000432862 727 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 AC079781.2-201ENST00000446424 169 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 RNU2-10P-201ENST00000516375 211 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 MIR3123-201ENST00000583417 75 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 AC108081.1-201ENST00000604358 221 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 PART1_1.1-201ENST00000611761 217 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 RNU2-54P-201ENST00000410299 190 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 5S_rRNA.15-201ENST00000611169 127 ntBASIC-2.5□□□□□ -2.81
VPS13AQ96RL7 RNU6-403P-201ENST00000363163 104 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 MTND4P8-201ENST00000514997 1362 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 MIR20A-201ENST00000362279 71 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.14-201ENST00000362415 103 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 RNU6-730P-201ENST00000383954 104 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 SNORA26.4-201ENST00000391188 123 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 RNU2-9P-201ENST00000410194 145 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 AC104629.2-201ENST00000468627 598 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 RNU1-142P-201ENST00000516682 145 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 AC080013.3-201ENST00000606839 578 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 MIR8066-201ENST00000617280 78 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 RNU6-424P-201ENST00000384367 105 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 RNU6-440P-201ENST00000390882 105 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 AC245047.3-201ENST00000429428 127 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 RNA5SP106-201ENST00000517274 100 ntBASIC-2.51□□□□□ -2.81
VPS13AQ96RL7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-2.52□□□□□ -2.81
VPS13AQ96RL7 AC011603.4-201ENST00000611325 277 ntBASIC-2.52□□□□□ -2.81
VPS13AQ96RL7 RNU6-79P-201ENST00000362511 107 ntBASIC-2.52□□□□□ -2.81
VPS13AQ96RL7 SNORA18-201ENST00000384416 132 ntBASIC-2.52□□□□□ -2.81
VPS13AQ96RL7 SNORA12.2-201ENST00000391040 156 ntBASIC-2.52□□□□□ -2.81
VPS13AQ96RL7 RNU6-966P-201ENST00000516479 104 ntBASIC-2.52□□□□□ -2.81
VPS13AQ96RL7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-2.52□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.222-201ENST00000364264 102 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 RNU6-926P-201ENST00000384075 107 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 HIGD1AP15-201ENST00000416198 280 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 TPTE2P5-203ENST00000458118 728 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 MIR4264-201ENST00000583520 66 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 AC098592.2-201ENST00000413158 265 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 AC084290.1-201ENST00000434995 374 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 RNU6-415P-201ENST00000516252 97 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 SNORA28-201ENST00000606769 126 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 FTX_4.1-201ENST00000616291 147 ntBASIC-2.53□□□□□ -2.81
VPS13AQ96RL7 Y_RNA.171-201ENST00000363760 102 ntBASIC-2.53□□□□□ -2.82
VPS13AQ96RL7 Y_RNA.697-201ENST00000516776 113 ntBASIC-2.53□□□□□ -2.82
VPS13AQ96RL7 VN1R88P-201ENST00000596787 292 ntBASIC-2.53□□□□□ -2.82
VPS13AQ96RL7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-2.53□□□□□ -2.82
VPS13AQ96RL7 RNU6-252P-201ENST00000363232 107 ntBASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 SNORD14.1-201ENST00000365609 90 ntBASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 AL592310.1-201ENST00000414330 671 ntBASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 RNU6-319P-201ENST00000516025 108 ntBASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 AP001033.2-201ENST00000609701 1003 ntBASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 RNU6-476P-201ENST00000384726 107 ntBASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 AL138960.2-201ENST00000625145 535 ntBASIC-2.54□□□□□ -2.82
VPS13AQ96RL7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 AC145423.2-201ENST00000610631 239 ntBASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 HMGN2P32-201ENST00000444648 269 ntBASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 MIR539-201ENST00000365690 78 ntBASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 MIR548H3-201ENST00000408771 118 ntBASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 COX7BP2-201ENST00000437976 242 ntBASIC-2.55□□□□□ -2.82
VPS13AQ96RL7 AC078795.2-201ENST00000602835 1252 ntBASIC-2.55□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms