Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU1-142P-201ENST00000516682 145 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RNU6-861P-201ENST00000516745 106 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 MIR4724-201ENST00000579485 89 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 AC005786.1-201ENST00000588553 154 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RN7SL853P-201ENST00000617250 223 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 AC022513.1-201ENST00000624512 117 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 U6.108-201ENST00000637764 58 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.121-201ENST00000363309 113 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 RNU4-70P-201ENST00000384579 139 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 AC099677.2-201ENST00000436385 175 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 RNU6-437P-201ENST00000459408 95 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 RPS26P45-201ENST00000471748 340 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 AC090255.1-201ENST00000495779 349 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 RNU1-104P-201ENST00000517280 175 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 AC024995.1-201ENST00000523014 93 ntBASIC2.19□□□□□ -2.06
ATG4AQ8WYN0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.24-201ENST00000362508 103 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.238-201ENST00000364441 102 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 RNU6-969P-201ENST00000383900 105 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 RNA5SP323-201ENST00000391094 133 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 RNU2-2P-201ENST00000410396 191 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 RNU2-4P-201ENST00000606190 192 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 U6.106-201ENST00000636360 105 ntBASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ATG4AQ8WYN0 RNU6-674P-201ENST00000363831 107 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.240-201ENST00000364469 95 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 SNORA8-201ENST00000384574 139 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.572-201ENST00000384757 98 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 MIR518A2-201ENST00000384966 87 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 HMGN2P39-201ENST00000398005 273 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 AC091021.1-201ENST00000468051 388 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 RNU6-1219P-201ENST00000516143 112 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 AC091178.2-201ENST00000584401 117 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 SNORD14A-201ENST00000606526 91 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 AC245060.5-201ENST00000610778 3293 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 AC018630.2-201ENST00000534866 2403 ntBASIC2.17□□□□□ -2.06
ATG4AQ8WYN0 AC100821.1-201ENST00000523153 2479 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 RNU6-103P-201ENST00000363686 107 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 MIR1283-2-201ENST00000408621 87 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 RNU6-383P-201ENST00000410864 94 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.662-201ENST00000516028 97 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 AC011604.1-201ENST00000545978 196 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 AL391903.3-201ENST00000612158 163 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 MIR6079-201ENST00000635807 62 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 AP006437.1-201ENST00000641440 3685 ntBASIC2.16□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.229-201ENST00000364347 113 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 RNU1-52P-201ENST00000384190 164 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 MIR597-201ENST00000384968 97 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 MIR616-201ENST00000385293 97 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 RNU11-3P-201ENST00000391111 133 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 RN7SKP51-201ENST00000410781 304 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 RNU4-53P-201ENST00000410828 140 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 RNA5SP270-201ENST00000411361 118 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 RNU7-94P-201ENST00000459576 63 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 AL163195.1-201ENST00000496941 348 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 AC008413.1-201ENST00000511864 177 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 AL929325.1-201ENST00000603096 117 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.15□□□□□ -2.07
ATG4AQ8WYN0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.75-201ENST00000362927 97 ntBASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 RNU6-1062P-201ENST00000383908 107 ntBASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 MIR562-201ENST00000384894 95 ntBASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 AC074198.2-201ENST00000508153 258 ntBASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 RNU6-341P-201ENST00000516973 96 ntBASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 AC091544.4-201ENST00000555268 342 ntBASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 MIR4744-201ENST00000581563 82 ntBASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 AC069114.2-201ENST00000604699 304 ntBASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATG4AQ8WYN0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.182-201ENST00000363880 111 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 RNU4-41P-201ENST00000364426 143 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.412-201ENST00000384001 104 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms