Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 Y_RNA.342-201ENST00000365352 113 ntBASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 SNORA46-201ENST00000384762 135 ntBASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 AC107297.1-201ENST00000459991 176 ntBASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 RNA5SP356-201ENST00000515972 94 ntBASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 AC026421.1-201ENST00000519101 163 ntBASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 AC141557.1-201ENST00000540982 400 ntBASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 MIR5197-201ENST00000583721 112 ntBASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 RPL12P50-201ENST00000603116 116 ntBASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 AC093908.1-201ENST00000623125 8092 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 AC002546.1-201ENST00000588041 2504 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-486P-201ENST00000363116 107 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 RNY1P10-201ENST00000363268 113 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 RPS12P18-201ENST00000442381 270 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 HMGN1P7-201ENST00000491722 313 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-693P-201ENST00000516134 107 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 RNU2-34P-201ENST00000516534 121 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 RNA5SP367-201ENST00000516557 118 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 AC084364.2-201ENST00000546924 395 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 AC103810.1-201ENST00000579873 453 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 AC008507.4-201ENST00000585464 127 ntBASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SHKBP1Q8TBC3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 Y_RNA.93-201ENST00000363066 109 ntBASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 Y_RNA.344-201ENST00000365381 112 ntBASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 MIR518F-201ENST00000384973 87 ntBASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 MIR520G-201ENST00000385064 90 ntBASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 RN7SKP132-201ENST00000516001 208 ntBASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 AL590808.1-201ENST00000618696 141 ntBASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.11□□□□□ -1.91
SHKBP1Q8TBC3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 Y_RNA.253-201ENST00000364562 112 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-1134P-201ENST00000365156 101 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 RNA5SP38-201ENST00000410750 119 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 Y_RNA.621-201ENST00000411065 96 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 SNRPGP10-201ENST00000432323 225 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 SNRPGP13-201ENST00000442212 177 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 PGBD4P5-201ENST00000445958 426 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 RN7SL20P-201ENST00000488827 297 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 AC007318.2-201ENST00000620999 243 ntBASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SHKBP1Q8TBC3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-349P-201ENST00000362402 107 ntBASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-438P-201ENST00000365561 103 ntBASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 MIR759-201ENST00000390224 91 ntBASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 AC105272.1-201ENST00000438604 198 ntBASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 SNRPGP3-201ENST00000469405 227 ntBASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 SNORA31.21-201ENST00000517180 77 ntBASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 ELOCP29-201ENST00000588193 334 ntBASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SHKBP1Q8TBC3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SHKBP1Q8TBC3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 Y_RNA.107-201ENST00000363190 121 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-690P-201ENST00000365242 106 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 Y_RNA.466-201ENST00000384294 113 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 RNA5SP252-201ENST00000391131 119 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 Y_RNA.593-201ENST00000410292 98 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 MIR4765-201ENST00000585007 77 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 AC091152.2-201ENST00000591628 2569 ntBASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHKBP1Q8TBC3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-228P-201ENST00000362700 106 ntBASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 RNU1-72P-201ENST00000362976 153 ntBASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 Y_RNA.298-201ENST00000364960 107 ntBASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 MIR548D2-201ENST00000384955 97 ntBASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 SNORA48.8-201ENST00000391324 134 ntBASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 HMGN2P18-201ENST00000450680 270 ntBASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-893P-201ENST00000458841 100 ntBASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 MRPS36P2-201ENST00000512569 299 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms