Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 SNORA8.3-201ENST00000384679 139 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 RNU6-220P-201ENST00000390919 107 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 AC016909.1-201ENST00000415916 166 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 AC003685.2-201ENST00000422795 395 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.98□□□□□ -2.09
LMO3Q8TAP4 AC010531.2-201ENST00000465012 153 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 RPS26P55-201ENST00000471178 356 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 AC005840.1-201ENST00000498412 377 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 RNA5SP20-201ENST00000515976 84 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 RN7SKP164-201ENST00000516138 266 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 RNU6-346P-201ENST00000516288 111 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 RNU7-115P-201ENST00000516433 55 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 RNU7-121P-201ENST00000516604 62 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LMO3Q8TAP4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.98□□□□□ -2.09
LMO3Q8TAP4 MIR4744-201ENST00000581563 82 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 Y_RNA.802-201ENST00000614892 130 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 AC006435.5-201ENST00000624486 112 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 U2.22-201ENST00000636441 106 ntBASIC1.98□□□□□ -2.09
LMO3Q8TAP4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
LMO3Q8TAP4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LMO3Q8TAP4 RNU6-103P-201ENST00000363686 107 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 Y_RNA.182-201ENST00000363880 111 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 RNU6-461P-201ENST00000364195 107 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 SNORA16.1-201ENST00000364597 132 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 RNU6-275P-201ENST00000364910 107 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 RNA5SP240-201ENST00000365355 128 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 RNU6-117P-201ENST00000365415 107 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 RNU6-438P-201ENST00000365561 103 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 SNORD116-13-201ENST00000384408 92 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 RNU6-578P-201ENST00000390980 103 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 AC123900.1-201ENST00000420390 96 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 AC018868.1-201ENST00000491307 315 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.97□□□□□ -2.09
LMO3Q8TAP4 AP003357.1-201ENST00000604497 148 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 AC004832.4-201ENST00000608952 331 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.97□□□□□ -2.09
LMO3Q8TAP4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.96□□□□□ -2.1
LMO3Q8TAP4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LMO3Q8TAP4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
LMO3Q8TAP4 Y_RNA.8-201ENST00000362353 102 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 RNU6-1205P-201ENST00000363625 106 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 RNU4-84P-201ENST00000364200 139 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 SNORD48-201ENST00000364953 64 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 SNORD113-1-201ENST00000365321 69 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 MIR561-201ENST00000385216 97 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 MIR613-201ENST00000385248 95 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 MIR616-201ENST00000385293 97 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 EBAG9P1-201ENST00000418955 543 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 AC008134.1-201ENST00000420943 193 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.96□□□□□ -2.1
LMO3Q8TAP4 AL357134.1-201ENST00000445848 426 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.96□□□□□ -2.1
LMO3Q8TAP4 AL137159.1-201ENST00000452808 512 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 AC117454.1-201ENST00000491120 168 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.96□□□□□ -2.1
LMO3Q8TAP4 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 RNU6-453P-201ENST00000516819 85 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 RNA5SP490-201ENST00000517141 136 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 AC005972.2-201ENST00000604690 348 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 AC012640.5-201ENST00000623897 319 ntBASIC1.96□□□□□ -2.1
LMO3Q8TAP4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LMO3Q8TAP4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LMO3Q8TAP4 AL356292.1-201ENST00000283110 373 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 RNU6-704P-201ENST00000364162 103 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 RNU6-1130P-201ENST00000365434 107 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 RNU6-969P-201ENST00000383900 105 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LMO3Q8TAP4 MIR1278-201ENST00000408753 81 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 SNORA36B-201ENST00000410438 131 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 RNA5SP511-201ENST00000410487 115 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.95□□□□□ -2.1
LMO3Q8TAP4 SEPT7P4-201ENST00000437076 306 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 HSPE1P21-201ENST00000438283 308 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.95□□□□□ -2.1
LMO3Q8TAP4 Y_RNA.797-201ENST00000515977 94 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 MIR548AY-201ENST00000617669 107 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.95□□□□□ -2.1
LMO3Q8TAP4 AC068647.2-201ENST00000637380 353 ntBASIC1.95□□□□□ -2.1
LMO3Q8TAP4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LMO3Q8TAP4 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 MIR627-201ENST00000384979 97 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 RNU6-239P-201ENST00000390990 99 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 AL162725.1-201ENST00000435405 301 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 RNU7-116P-201ENST00000516940 62 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 MIR4419B-201ENST00000577260 68 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 MIR4431-201ENST00000579990 94 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 MIR3117-201ENST00000584034 78 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms