Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUP43Q8NFH3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.73□□□□□ -1.97
NUP43Q8NFH3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NUP43Q8NFH3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NUP43Q8NFH3 MIR422A-201ENST00000362286 90 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 SNORA9.2-201ENST00000365361 133 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 MIRLET7F2-201ENST00000385277 83 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 SNORD72-201ENST00000390994 80 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 AC063976.4-201ENST00000421971 163 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 AC104332.2-201ENST00000429959 156 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 SNRPGP10-201ENST00000432323 225 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 RPS15AP28-201ENST00000435088 386 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 RNU5E-3P-201ENST00000515913 68 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 RNU1-104P-201ENST00000517280 175 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 AC107016.2-201ENST00000547968 190 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 AL670379.3-201ENST00000605040 251 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 MIR6079-201ENST00000635807 62 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 AC008264.2-201ENST00000610193 3731 ntBASIC2.73□□□□□ -1.97
NUP43Q8NFH3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.73□□□□□ -1.97
NUP43Q8NFH3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.73□□□□□ -1.97
NUP43Q8NFH3 MTND5P32-201ENST00000560711 1802 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NUP43Q8NFH3 SNORA33-201ENST00000363664 130 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 RNU6-301P-201ENST00000384277 107 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NUP43Q8NFH3 SNORA12.1-201ENST00000390873 148 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AC233266.1-201ENST00000454518 96 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 RNU6-504P-201ENST00000516568 104 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 RNU6-341P-201ENST00000516973 96 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 RNU6-56P-201ENST00000516986 93 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
NUP43Q8NFH3 MIR3129-201ENST00000581095 76 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AC008507.4-201ENST00000585464 127 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AL022345.2-201ENST00000606307 135 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AC242852.1-201ENST00000612151 96 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AL359075.3-201ENST00000613288 217 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AC244015.1-201ENST00000622301 99 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AC006386.2-201ENST00000624491 75 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AC012005.1-201ENST00000624575 75 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 AC018630.2-201ENST00000534866 2403 ntBASIC2.72□□□□□ -1.97
NUP43Q8NFH3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
NUP43Q8NFH3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP43Q8NFH3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
NUP43Q8NFH3 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 RNU6-461P-201ENST00000364195 107 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 SNORA22-201ENST00000383907 134 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 SNORD61-201ENST00000384252 73 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 AL117342.1-201ENST00000404861 406 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 Z96811.1-201ENST00000445880 108 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 RNA5SP236-201ENST00000516169 116 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP43Q8NFH3 AC104984.5-201ENST00000586878 94 ntBASIC2.71□□□□□ -1.98
NUP43Q8NFH3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP43Q8NFH3 AL365361.1-201ENST00000566942 3481 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
NUP43Q8NFH3 RNU6-1298P-201ENST00000362456 101 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 RNU6-888P-201ENST00000363010 101 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 SNORD114-6-201ENST00000364393 72 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 RNA5SP125-201ENST00000364843 120 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 SNORA25B-201ENST00000365507 128 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 MIR512-1-201ENST00000384913 84 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 MIR548A2-201ENST00000384956 97 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 RNU11-5P-201ENST00000391216 129 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 SRIP3-201ENST00000413200 219 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 EDDM3CP-201ENST00000415977 425 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 RN7SKP19-201ENST00000516016 252 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 RNA5SP341-201ENST00000516261 117 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 IGKV1-22-201ENST00000524313 326 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 AL358944.1-201ENST00000528537 144 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 MIR3613-201ENST00000579844 87 ntBASIC2.7□□□□□ -1.98
NUP43Q8NFH3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.7□□□□□ -1.98
NUP43Q8NFH3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
NUP43Q8NFH3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
NUP43Q8NFH3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 ZNF271P-202ENST00000465539 1970 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 SNORD24-201ENST00000383884 75 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 AL031121.1-201ENST00000406553 254 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 AF228730.3-201ENST00000436691 102 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 RNU6-1270P-201ENST00000517128 108 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 MIR7106-201ENST00000612419 65 ntBASIC2.69□□□□□ -1.98
NUP43Q8NFH3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms