Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 SNORA26.5-201ENST00000391215 123 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 MTCO2P33-201ENST00000402100 465 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.626-201ENST00000411288 95 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 RNA5SP270-201ENST00000411361 118 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 MIR3169-201ENST00000578032 83 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 AC005972.2-201ENST00000604690 348 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 AC013791.1-201ENST00000616619 62 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNU6-457P-201ENST00000363999 107 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNU6-117P-201ENST00000365415 107 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 SNORD116-13-201ENST00000384408 92 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNA5SP323-201ENST00000391094 133 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 CST2P1-201ENST00000425770 87 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 AC104332.1-201ENST00000440471 797 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 AL138752.1-201ENST00000452964 351 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 U8.19-201ENST00000459095 133 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNU7-141P-201ENST00000459304 62 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNA5SP182-201ENST00000516064 82 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNU7-99P-201ENST00000516271 62 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNU1-142P-201ENST00000516682 145 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNU6-63P-201ENST00000516690 95 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNU7-116P-201ENST00000516940 62 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 MIR5692C2-201ENST00000577959 77 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 AC005786.1-201ENST00000588553 154 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 AC004832.4-201ENST00000608952 331 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 AL137847.3-201ENST00000611521 109 ntBASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMC1BQ8NDV3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 RNU1-96P-201ENST00000364163 162 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 AL355497.1-201ENST00000406262 551 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 EBAG9P1-201ENST00000418955 543 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 BX510359.4-201ENST00000423750 193 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 Z98949.2-201ENST00000440996 144 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 RNA5SP200-201ENST00000516360 103 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 RNA5SP480-201ENST00000516840 109 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 AC134026.1-201ENST00000623249 2239 ntBASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMC1BQ8NDV3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 MIR411-201ENST00000362239 96 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.274-201ENST00000364714 101 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 RNU11-3P-201ENST00000391111 133 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 MTND5P15-201ENST00000434246 349 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 AL162725.1-201ENST00000435405 301 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 Z83818.1-201ENST00000603584 150 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 SNORD14A-201ENST00000606526 91 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 MIR548AY-201ENST00000617669 107 ntBASIC2.59□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.29-201ENST00000362570 113 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 RNU6-862P-201ENST00000362804 105 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 Y_RNA.293-201ENST00000364908 93 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.58□□□□□ -2
SMC1BQ8NDV3 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 Y_RNA.785-201ENST00000384290 109 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 MIR518A2-201ENST00000384966 87 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 RNA5SP465-201ENST00000391195 109 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 SNORA40.18-201ENST00000391200 128 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 RNA5SP467-201ENST00000391274 118 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AL117342.1-201ENST00000404861 406 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 RNA5SP511-201ENST00000410487 115 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AP1B1P2-201ENST00000416196 106 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AC117454.1-201ENST00000491120 168 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 HMGB3P3-201ENST00000510526 400 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 RNU7-115P-201ENST00000516433 55 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 RNU6-182P-201ENST00000516970 105 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AC024995.1-201ENST00000523014 93 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AC015720.1-201ENST00000565251 277 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AP003357.1-201ENST00000604497 148 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AC011921.3-201ENST00000605540 361 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 MIR6895-201ENST00000613497 78 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AL365265.1-201ENST00000621045 234 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 MIR6766-201ENST00000622641 72 ntBASIC2.58□□□□□ -2
SMC1BQ8NDV3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMC1BQ8NDV3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMC1BQ8NDV3 RNU6-144P-201ENST00000383951 107 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 RNU6-136P-201ENST00000384663 107 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 HMGN2P39-201ENST00000398005 273 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 RNU2-2P-201ENST00000410396 191 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 Y_RNA.793-201ENST00000411222 111 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 SNORA81.3-201ENST00000517283 198 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 IGLV3-17-201ENST00000519099 244 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.57□□□□□ -2
SMC1BQ8NDV3 AC024405.2-202ENST00000532731 184 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 POLR3GP1-201ENST00000594073 261 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 AC073413.2-201ENST00000604332 360 ntBASIC2.57□□□□□ -2
SMC1BQ8NDV3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
SMC1BQ8NDV3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms