Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 SNORA4.2-201ENST00000365313 147 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-1323P-201ENST00000384025 107 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 Y_RNA.518-201ENST00000384552 113 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-136P-201ENST00000384663 107 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 AC091959.1-201ENST00000495857 238 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 RNU7-28P-201ENST00000516759 62 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 MIR4709-201ENST00000577272 72 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 AL078604.3-201ENST00000615580 211 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 AP001282.2-201ENST00000616149 309 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 U4.1-201ENST00000620349 87 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 AC068647.2-201ENST00000637380 353 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.237-201ENST00000364439 102 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.267-201ENST00000364679 109 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 SNORA26.9-201ENST00000391322 122 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 SNORA27.4-201ENST00000516650 95 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 SCARNA24.2-201ENST00000516968 130 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 SNORA44.1-201ENST00000517031 108 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 MIR8054-201ENST00000620877 86 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-414P-201ENST00000363705 104 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-472P-201ENST00000384299 107 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 SNORA72-201ENST00000384339 132 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.483-201ENST00000384380 101 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 MT-TW-201ENST00000387382 68 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 AL034345.1-201ENST00000407768 123 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 AC233266.1-201ENST00000454518 96 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 AC242852.1-201ENST00000612151 96 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 7SK.10-201ENST00000621414 298 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 AC244015.1-201ENST00000622301 99 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 AC100821.1-201ENST00000523153 2479 ntBASIC2.32□□□□□ -2.04
PRPF38AQ8NAV1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 UBE2WP1-201ENST00000362030 340 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.144-201ENST00000363521 113 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.172-201ENST00000363765 102 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.396-201ENST00000383949 103 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-463P-201ENST00000384340 107 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-440P-201ENST00000390882 105 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-482P-201ENST00000391068 107 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 RPS4XP11-201ENST00000446897 772 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 HMGN2P23-201ENST00000456759 269 ntBASIC2.31□□□□□ -2.04
PRPF38AQ8NAV1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 SNORA72.4-201ENST00000384174 132 ntBASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 MIR568-201ENST00000385036 95 ntBASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 RNU7-34P-201ENST00000459394 64 ntBASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-1291P-201ENST00000516591 104 ntBASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 AC011604.1-201ENST00000545978 196 ntBASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 POLR3GP1-201ENST00000594073 261 ntBASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 AP003357.1-201ENST00000604497 148 ntBASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 MIR548AY-201ENST00000617669 107 ntBASIC2.3□□□□□ -2.04
PRPF38AQ8NAV1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.44-201ENST00000362676 108 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-899P-201ENST00000363947 107 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 RNA5SP482-201ENST00000391269 118 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.621-201ENST00000411065 96 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 AC104332.1-201ENST00000440471 797 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 AL049830.1-201ENST00000468034 425 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 RNU7-115P-201ENST00000516433 55 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-548P-201ENST00000517083 115 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 MIR5089-201ENST00000580047 84 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 U2.14-201ENST00000615943 113 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 uc_338.20-201ENST00000621563 178 ntBASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.193-201ENST00000363979 102 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 RNA5SP99-201ENST00000364020 114 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 RNU6-702P-201ENST00000364982 107 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 Y_RNA.452-201ENST00000384202 108 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 MIR583-201ENST00000384846 75 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 MIR548H3-201ENST00000408771 118 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 RNU2-40P-201ENST00000410833 196 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 AC110588.1-201ENST00000559699 137 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 MIR6845-201ENST00000613182 61 ntBASIC2.28□□□□□ -2.04
PRPF38AQ8NAV1 SNORA1B-201ENST00000362535 133 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-1272P-201ENST00000362776 107 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-801P-201ENST00000364087 105 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.275-201ENST00000364726 110 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.352-201ENST00000365439 102 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-1031P-201ENST00000384773 107 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 AL135790.2-201ENST00000437701 267 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 SNORD127-201ENST00000458892 86 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 SNORA31.10-201ENST00000516482 106 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 RNA5SP364-201ENST00000516938 78 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 AC004817.2-201ENST00000561794 651 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 AC127455.1-201ENST00000565496 145 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms