Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 HSPE1P13-201ENST00000451143 297 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.631-201ENST00000459607 101 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AL163540.1-201ENST00000485382 386 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AC093852.1-201ENST00000503587 266 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-475P-201ENST00000516073 104 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 MIR4778-201ENST00000577635 80 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AP000942.3-201ENST00000603702 160 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AC124312.5-201ENST00000604451 268 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 SNORA28-201ENST00000606769 126 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AC011373.1-201ENST00000607270 237 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 PART1_1.1-201ENST00000611761 217 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 SNORD3E-202ENST00000627253 216 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.28-201ENST00000362554 111 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 SNORD33-201ENST00000362761 85 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.128-201ENST00000363391 112 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 RNA5SP99-201ENST00000364020 114 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 RNA5SP190-201ENST00000365222 118 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.361-201ENST00000365515 120 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 MIR562-201ENST00000384894 95 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 MIR520G-201ENST00000385064 90 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.645-201ENST00000391229 102 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 RNU2-61P-201ENST00000411069 191 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 AL603825.1-201ENST00000438481 80 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 RNU1-123P-201ENST00000458950 160 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 AL049830.1-201ENST00000468034 425 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-397P-201ENST00000516226 104 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-988P-201ENST00000519081 107 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 AP002004.2-201ENST00000531656 154 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 AL512310.8-201ENST00000550183 120 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 AL162424.1-201ENST00000602325 221 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 AC073349.3-201ENST00000617616 186 ntBASIC1.06□□□□□ -2.24
CCDC71LQ8N9Z2 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.216-201ENST00000364205 93 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.389-201ENST00000383924 113 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.462-201ENST00000384268 102 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.551-201ENST00000384661 102 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-21P-201ENST00000384710 107 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 CALM2P4-201ENST00000430810 426 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 AL162725.1-201ENST00000435405 301 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-1046P-201ENST00000516538 107 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.713-201ENST00000517013 96 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 MIR4423-201ENST00000580922 80 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 AC104695.3-201ENST00000604052 296 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 AC134503.1-201ENST00000633048 54 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 AC068647.2-201ENST00000637380 353 ntBASIC1.05□□□□□ -2.24
CCDC71LQ8N9Z2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RNU1-17P-201ENST00000363022 152 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 SNORA22B-201ENST00000383876 138 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 U8.16-201ENST00000391279 133 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 MIR548P-201ENST00000408336 84 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-101P-201ENST00000410323 104 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-855P-201ENST00000410395 104 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-130P-201ENST00000411112 103 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 AL390729.2-201ENST00000416137 156 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 DYNLT3P2-201ENST00000442517 295 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RPS4XP11-201ENST00000446897 772 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 AC092991.1-201ENST00000477176 376 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RPL30P7-201ENST00000479312 323 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RNA5SP168-201ENST00000516642 112 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RNU7-28P-201ENST00000516759 62 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 RN7SKP88-201ENST00000516847 250 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 AC090821.2-201ENST00000523552 176 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 MIR3145-201ENST00000580727 82 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 DEFB117-201ENST00000602356 141 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 AC004832.4-201ENST00000608952 331 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
CCDC71LQ8N9Z2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 SNORD81.1-201ENST00000363064 77 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 RNU4-41P-201ENST00000364426 143 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.341-201ENST00000365341 102 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-424P-201ENST00000384367 105 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-823P-201ENST00000391042 103 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 RNA5SP482-201ENST00000391269 118 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 CYCSP49-201ENST00000420810 319 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 Z98949.2-201ENST00000440996 144 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 AC093850.1-201ENST00000454121 251 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 AC010655.3-201ENST00000478818 450 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 OR9P1P-201ENST00000496431 281 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 RNU7-12P-201ENST00000516030 62 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-922P-201ENST00000516753 99 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 RNU1-92P-201ENST00000517017 135 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 MIR3664-201ENST00000579074 99 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms