Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SNORA4.2-201ENST00000365313 147 ntBASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 Y_RNA.556-201ENST00000384677 113 ntBASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 AC019129.1-201ENST00000403786 261 ntBASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 AC091959.1-201ENST00000495857 238 ntBASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 DEFB108E-201ENST00000524692 240 ntBASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 AC005972.2-201ENST00000604690 348 ntBASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 MIR8054-201ENST00000620877 86 ntBASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 RNU6-661P-201ENST00000362409 107 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 RNU1-17P-201ENST00000363022 152 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 Y_RNA.237-201ENST00000364439 102 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 RNU6-514P-201ENST00000384208 107 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 RNU6-950P-201ENST00000384651 107 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 RNU6-136P-201ENST00000384663 107 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 RNU6-360P-201ENST00000390944 104 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 MIR1302-3-201ENST00000408128 138 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 snoU13.27-201ENST00000459278 104 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 SNORA31.10-201ENST00000516482 106 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 AL358944.1-201ENST00000528537 144 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 AC103810.8-201ENST00000607347 118 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 AL078604.3-201ENST00000615580 211 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 AC100821.1-201ENST00000523153 2479 ntBASIC2.05□□□□□ -2.08
CCDC33Q8N5R6 AL391987.6-201ENST00000305671 199 ntBASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 UBE2WP1-201ENST00000362030 340 ntBASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 RNU6-801P-201ENST00000364087 105 ntBASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 RNU6-1323P-201ENST00000384025 107 ntBASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 AC104332.1-201ENST00000440471 797 ntBASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 RNU6-1291P-201ENST00000516591 104 ntBASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 AC110588.1-201ENST00000559699 137 ntBASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC33Q8N5R6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 RNU4-13P-201ENST00000364019 141 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 SNORA72.4-201ENST00000384174 132 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 Y_RNA.668-201ENST00000516233 93 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 SCARNA24.2-201ENST00000516968 130 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 AP002004.2-201ENST00000531656 154 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 AL512605.2-201ENST00000592972 256 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 AL929325.1-201ENST00000603096 117 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 AP003357.1-201ENST00000604497 148 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 AC068647.2-201ENST00000637380 353 ntBASIC2.03□□□□□ -2.08
CCDC33Q8N5R6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 SNORA1B-201ENST00000362535 133 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.267-201ENST00000364679 109 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 SNORA12.1-201ENST00000390873 148 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 RNU6-440P-201ENST00000390882 105 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 SUMO2P12-201ENST00000405924 140 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 SNORA27.4-201ENST00000516650 95 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 RNU7-116P-201ENST00000516940 62 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 MIR4709-201ENST00000577272 72 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 U2.14-201ENST00000615943 113 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCDC33Q8N5R6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.217-201ENST00000364214 105 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 RNU6-439P-201ENST00000384188 106 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 RNU6-196P-201ENST00000384315 107 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 SNORA72-201ENST00000384339 132 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 SNORA26.5-201ENST00000391215 123 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 RN7SKP200-201ENST00000410564 320 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 COX6CP10-201ENST00000416832 224 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.641-201ENST00000459414 105 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 RNU7-115P-201ENST00000516433 55 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC33Q8N5R6 RNU6-1272P-201ENST00000362776 107 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.144-201ENST00000363521 113 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.288-201ENST00000364854 92 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.338-201ENST00000365320 114 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 RNU6-1031P-201ENST00000384773 107 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 RNU6-763P-201ENST00000390865 106 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 RNU2-14P-201ENST00000411053 191 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 FTH1P12-201ENST00000432137 551 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 RNU7-141P-201ENST00000459304 62 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 RNU2-56P-201ENST00000516826 190 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 AC011604.1-201ENST00000545978 196 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 AC127455.1-201ENST00000565496 145 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 311.3 ms