Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC097462.1-201ENST00000514125 324 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 RNU6-861P-201ENST00000516745 106 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 AC015720.1-201ENST00000565251 277 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 MIR548AY-201ENST00000617669 107 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 MIR338-201ENST00000636369 67 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 Y_RNA.24-201ENST00000362508 103 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 RNU6-682P-201ENST00000363843 106 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.233-201ENST00000364407 101 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 RNU6-144P-201ENST00000383951 107 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 RNU6-886P-201ENST00000384319 105 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 SNORA8.3-201ENST00000384679 139 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 RNU6-376P-201ENST00000384731 106 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 MIR518A2-201ENST00000384966 87 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 MIR626-201ENST00000385032 94 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 RNA5SP467-201ENST00000391274 118 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 EBAG9P1-201ENST00000418955 543 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 AL162725.1-201ENST00000435405 301 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 RNU7-116P-201ENST00000516940 62 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 AC100767.1-201ENST00000528178 123 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 AP003357.1-201ENST00000604497 148 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.802-201ENST00000614892 130 ntBASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CLIP4Q8N3C7 RNU1-96P-201ENST00000364163 162 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 RNU4-17P-201ENST00000365598 141 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.572-201ENST00000384757 98 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 RN7SKP51-201ENST00000410781 304 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 RPS29P21-201ENST00000496272 170 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 YWHAEP4-201ENST00000505390 198 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 IGKV3-31-201ENST00000523109 329 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 MIR3169-201ENST00000578032 83 ntBASIC1.89□□□□□ -2.11
CLIP4Q8N3C7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.7-201ENST00000362352 102 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RNU6-23P-201ENST00000363283 107 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.180-201ENST00000363867 113 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 SNORA64-201ENST00000384674 134 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.571-201ENST00000384753 98 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 SNORD23.1-201ENST00000408212 104 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RNU2-2P-201ENST00000410396 191 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RNU6-383P-201ENST00000410864 94 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RN7SL429P-201ENST00000479090 223 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RN7SL489P-201ENST00000486185 223 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RN7SL327P-201ENST00000488659 223 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RPL23AP54-201ENST00000495129 419 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 MIR4724-201ENST00000579485 89 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 AC007229.1-201ENST00000590455 412 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 AC073413.2-201ENST00000604332 360 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RNU2-4P-201ENST00000606190 192 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RN7SL853P-201ENST00000617250 223 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 AC012640.5-201ENST00000623897 319 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLIP4Q8N3C7 RNU6-862P-201ENST00000362804 105 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 snoU2_19.4-201ENST00000364329 80 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 RNU6-969P-201ENST00000383900 105 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 RNU4-70P-201ENST00000384579 139 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 MIR526A2-201ENST00000390198 65 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 PCNPP3-201ENST00000393579 471 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 AL117342.1-201ENST00000404861 406 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 Z98742.3-201ENST00000418637 326 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 AC074198.2-201ENST00000508153 258 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.662-201ENST00000516028 97 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 RNU6-1219P-201ENST00000516143 112 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 RNU7-99P-201ENST00000516271 62 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 RNU1-142P-201ENST00000516682 145 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 AC127455.1-201ENST00000565496 145 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 AL353149.1-201ENST00000610667 244 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 AL359075.3-201ENST00000613288 217 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 ZNF658B-202ENST00000615961 3375 ntBASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CLIP4Q8N3C7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 MIR367-201ENST00000362299 68 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 RNU1-58P-201ENST00000362413 163 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 RNU6-1062P-201ENST00000383908 107 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 SNORA72-201ENST00000384339 132 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms