Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC091178.2-201ENST00000584401 117 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 JPX_2.1-201ENST00000614161 69 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 MAPK10-266ENST00000641066 6555 ntBASIC2.62□□□□□ -1.99
TRIM48Q8IWZ4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-862P-201ENST00000362804 105 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNA5SP493-201ENST00000364115 91 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-160P-201ENST00000384591 107 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 MIR520G-201ENST00000385064 90 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNA5SP323-201ENST00000391094 133 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNU2-70P-201ENST00000410718 179 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 AL353689.1-201ENST00000438895 199 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 SNORD77.4-201ENST00000516158 81 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNU1-142P-201ENST00000516682 145 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNU2-56P-201ENST00000516826 190 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-826P-201ENST00000516827 104 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1234P-201ENST00000516877 103 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 MIR3646-201ENST00000578301 84 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 MIR3162-201ENST00000581818 82 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 Pinc.1-201ENST00000616452 154 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 MIR6079-201ENST00000635807 62 ntBASIC2.61□□□□□ -1.99
TRIM48Q8IWZ4 Y_RNA.261-201ENST00000364631 102 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 SNORA8-201ENST00000384574 139 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 SNORA12.1-201ENST00000390873 148 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 SNORA75.5-201ENST00000391291 81 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 RNU2-55P-201ENST00000411146 174 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 RN7SL297P-201ENST00000483161 293 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-313P-201ENST00000516317 112 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 RNU7-149P-201ENST00000516739 59 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 MIR4513-201ENST00000581077 86 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 MIR4635-201ENST00000583759 79 ntBASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM48Q8IWZ4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1290P-201ENST00000362957 109 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 MIR562-201ENST00000384894 95 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-1168P-201ENST00000390831 104 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 AC108938.1-201ENST00000451204 136 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 RNU1-131P-201ENST00000458943 161 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 TRBV12-1-201ENST00000479785 344 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-479P-201ENST00000516348 105 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 RNU6-56P-201ENST00000516986 93 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 AC011603.4-201ENST00000611325 277 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 U4atac.1-201ENST00000618345 95 ntBASIC2.59□□□□□ -1.99
TRIM48Q8IWZ4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
TRIM48Q8IWZ4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
TRIM48Q8IWZ4 AC018630.2-201ENST00000534866 2403 ntBASIC2.59□□□□□ -2
TRIM48Q8IWZ4 AC092435.3-201ENST00000565538 3654 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM48Q8IWZ4 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
TRIM48Q8IWZ4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM48Q8IWZ4 Y_RNA.71-201ENST00000362892 104 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 Y_RNA.218-201ENST00000364218 104 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 RNU6-978P-201ENST00000364371 103 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 Y_RNA.251-201ENST00000364551 99 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 RNU6-597P-201ENST00000365620 102 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 MLLT10P1-201ENST00000418346 262 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.58□□□□□ -2
TRIM48Q8IWZ4 OR9P1P-201ENST00000496431 281 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 AL163195.1-201ENST00000496941 348 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 AC090142.3-201ENST00000519012 385 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.58□□□□□ -2
TRIM48Q8IWZ4 MIR4672-201ENST00000583126 81 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 AL353149.1-201ENST00000610667 244 ntBASIC2.58□□□□□ -2
TRIM48Q8IWZ4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
TRIM48Q8IWZ4 RNU6-23P-201ENST00000363283 107 ntBASIC2.57□□□□□ -2
TRIM48Q8IWZ4 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
TRIM48Q8IWZ4 SNRPGP10-201ENST00000432323 225 ntBASIC2.57□□□□□ -2
TRIM48Q8IWZ4 RNU7-26P-201ENST00000458980 63 ntBASIC2.57□□□□□ -2
TRIM48Q8IWZ4 HMGN1P7-201ENST00000491722 313 ntBASIC2.57□□□□□ -2
TRIM48Q8IWZ4 RN7SL636P-201ENST00000497504 294 ntBASIC2.57□□□□□ -2
TRIM48Q8IWZ4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.57□□□□□ -2
TRIM48Q8IWZ4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM48Q8IWZ4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
TRIM48Q8IWZ4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM48Q8IWZ4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM48Q8IWZ4 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 SNORA25.7-201ENST00000364375 127 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.56□□□□□ -2
TRIM48Q8IWZ4 AC245047.4-201ENST00000433189 144 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 AC099677.2-201ENST00000436385 175 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 RNA5SP153-201ENST00000516498 76 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 RNU6-341P-201ENST00000516973 96 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 AP001328.1-201ENST00000528550 176 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 CYCSP26-201ENST00000534107 320 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 MIR3169-201ENST00000578032 83 ntBASIC2.56□□□□□ -2
TRIM48Q8IWZ4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM48Q8IWZ4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM48Q8IWZ4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM48Q8IWZ4 MIR126-201ENST00000362291 85 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms