Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SNORD81.1-201ENST00000363064 77 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 RNU6-196P-201ENST00000384315 107 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 RNU6-21P-201ENST00000384710 107 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 RNU4-30P-201ENST00000410245 143 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.96□□□□□ -2.1
HERC6Q8IVU3 RPS26P45-201ENST00000471748 340 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 RNU7-110P-201ENST00000516891 62 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.96□□□□□ -2.1
HERC6Q8IVU3 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
HERC6Q8IVU3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.84-201ENST00000363011 104 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 RNU1-22P-201ENST00000363334 158 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 SNORD113-8-201ENST00000363497 74 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 SNORA33-201ENST00000363664 130 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 SNORD115-30-201ENST00000364117 82 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.483-201ENST00000384380 101 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 RNU6-376P-201ENST00000384731 106 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 RPS26P55-201ENST00000471178 356 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 RNU6-1143P-201ENST00000516125 104 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 RNU6-496P-201ENST00000516145 99 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 RNU6-570P-201ENST00000517051 105 ntBASIC1.95□□□□□ -2.1
HERC6Q8IVU3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.95□□□□□ -2.1
HERC6Q8IVU3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.95□□□□□ -2.1
HERC6Q8IVU3 AC018630.2-201ENST00000534866 2403 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 MIR518E-201ENST00000385252 88 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HERC6Q8IVU3 RNU6-710P-201ENST00000410424 105 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 RN7SKP200-201ENST00000410564 320 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
HERC6Q8IVU3 HSPE1P25-201ENST00000455484 251 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 snoU13.27-201ENST00000459278 104 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
HERC6Q8IVU3 MIR502-201ENST00000606349 86 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 U6.108-201ENST00000637764 58 ntBASIC1.94□□□□□ -2.1
HERC6Q8IVU3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
HERC6Q8IVU3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.16-201ENST00000362421 102 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.331-201ENST00000365267 102 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.452-201ENST00000384202 108 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 RNU6-505P-201ENST00000384427 107 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 MIR30A-201ENST00000385092 71 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 AL031003.1-201ENST00000404229 172 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 RNU6-1203P-201ENST00000410703 110 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 HSPE1P13-201ENST00000451143 297 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 SEPT14P8-201ENST00000508026 178 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 RNA5SP437-201ENST00000517249 129 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.93□□□□□ -2.1
HERC6Q8IVU3 MIR4709-201ENST00000577272 72 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 MIR3149-201ENST00000584629 83 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 AC073413.2-201ENST00000604332 360 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 AC012493.3-201ENST00000604494 112 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 BX248123.2-201ENST00000606318 124 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 AL512598.1-201ENST00000610158 273 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 U4.1-201ENST00000620349 87 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.93□□□□□ -2.1
HERC6Q8IVU3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
HERC6Q8IVU3 MIR489-201ENST00000384923 84 ntBASIC1.92□□□□□ -2.1
HERC6Q8IVU3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HERC6Q8IVU3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.92□□□□□ -2.1
HERC6Q8IVU3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.92□□□□□ -2.1
HERC6Q8IVU3 RNU7-95P-201ENST00000459222 64 ntBASIC1.92□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.92□□□□□ -2.1
HERC6Q8IVU3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.92□□□□□ -2.1
HERC6Q8IVU3 MIR3198-2-201ENST00000577868 80 ntBASIC1.92□□□□□ -2.1
HERC6Q8IVU3 AL162424.1-201ENST00000602325 221 ntBASIC1.92□□□□□ -2.1
HERC6Q8IVU3 SNORD113-5-201ENST00000607261 78 ntBASIC1.92□□□□□ -2.1
HERC6Q8IVU3 AP001282.2-201ENST00000616149 309 ntBASIC1.92□□□□□ -2.1
HERC6Q8IVU3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.461-201ENST00000384263 103 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 RNU6-713P-201ENST00000384761 107 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 MIR520G-201ENST00000385064 90 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 RNA5SP109-201ENST00000391010 116 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 MIR1267-201ENST00000408723 78 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 AC245047.3-201ENST00000429428 127 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 RNU7-128P-201ENST00000517247 62 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 MIR6079-201ENST00000635807 62 ntBASIC1.91□□□□□ -2.1
HERC6Q8IVU3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.9□□□□□ -2.11
HERC6Q8IVU3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HERC6Q8IVU3 MIR1302-6-201ENST00000408466 90 ntBASIC1.9□□□□□ -2.11
HERC6Q8IVU3 TRBVB-201ENST00000477100 408 ntBASIC1.9□□□□□ -2.11
HERC6Q8IVU3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.9□□□□□ -2.11
HERC6Q8IVU3 RNU6-436P-201ENST00000516171 114 ntBASIC1.9□□□□□ -2.11
HERC6Q8IVU3 SNORA28-201ENST00000606769 126 ntBASIC1.9□□□□□ -2.11
HERC6Q8IVU3 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
HERC6Q8IVU3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.9□□□□□ -2.11
HERC6Q8IVU3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.9□□□□□ -2.11
HERC6Q8IVU3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms