Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 MIR4679-1-201ENST00000637619 75 ntBASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AL136360.1-201ENST00000503377 1900 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AC062016.1-201ENST00000355719 319 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 RNU6-1080P-201ENST00000383982 107 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 RNU6-147P-201ENST00000383983 107 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 RNU6-484P-201ENST00000384016 107 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 SNORA8-201ENST00000384574 139 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 RNU6-136P-201ENST00000384663 107 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 RNA5SP496-201ENST00000391240 109 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 RN7SKP101-201ENST00000411376 320 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 MLLT10P1-201ENST00000418346 262 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AL158147.1-201ENST00000443970 75 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AC023449.1-201ENST00000454464 154 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 RN7SL20P-201ENST00000488827 297 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 Y_RNA.692-201ENST00000516627 105 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AC133485.4-201ENST00000561835 220 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AC138907.4-201ENST00000570107 226 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 MIR3169-201ENST00000578032 83 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 MIR3121-201ENST00000579680 77 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NPAS4Q8IUM7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 SNORA9.2-201ENST00000365361 133 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 Y_RNA.432-201ENST00000384087 111 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 RNA5SP270-201ENST00000411361 118 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 AC087499.2-201ENST00000432861 149 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 SNORD33.1-201ENST00000516213 88 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 RNU6-1061P-201ENST00000516530 99 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 RNU6-1096P-201ENST00000517089 102 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 AL021707.8-201ENST00000609428 183 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 AC007318.2-201ENST00000620999 243 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPAS4Q8IUM7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 RNU6-508P-201ENST00000363231 103 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 Y_RNA.114-201ENST00000363265 113 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 RNU6-674P-201ENST00000363831 107 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 Y_RNA.280-201ENST00000364765 112 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 RNA5SP465-201ENST00000391195 109 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 RNA5SP467-201ENST00000391274 118 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 RPS4XP11-201ENST00000446897 772 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 AC011604.1-201ENST00000545978 196 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 U6.95-201ENST00000636931 70 ntBASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS4Q8IUM7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 RNU6-862P-201ENST00000362804 105 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 Y_RNA.621-201ENST00000411065 96 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 AC063976.4-201ENST00000421971 163 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 AC063976.3-201ENST00000426849 329 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 AC108938.1-201ENST00000451204 136 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 RNU6-1299P-201ENST00000516316 100 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 AL929325.1-201ENST00000603096 117 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 AC069114.2-201ENST00000604699 304 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.16□□□□□ -1.9
NPAS4Q8IUM7 AC018630.2-201ENST00000534866 2403 ntBASIC3.15□□□□□ -1.9
NPAS4Q8IUM7 Y_RNA.120-201ENST00000363304 110 ntBASIC3.15□□□□□ -1.91
NPAS4Q8IUM7 AL117342.1-201ENST00000404861 406 ntBASIC3.15□□□□□ -1.91
NPAS4Q8IUM7 AC069257.2-201ENST00000441819 155 ntBASIC3.15□□□□□ -1.91
NPAS4Q8IUM7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.15□□□□□ -1.91
NPAS4Q8IUM7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.15□□□□□ -1.91
NPAS4Q8IUM7 AC022202.1-201ENST00000613515 211 ntBASIC3.15□□□□□ -1.91
NPAS4Q8IUM7 MIR6079-201ENST00000635807 62 ntBASIC3.15□□□□□ -1.91
NPAS4Q8IUM7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 Y_RNA.91-201ENST00000363042 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms