Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC092447.9-201ENST00000603395 144 ntBASIC1.33□□□□□ -2.2
PRPF39Q86UA1 MIR4272-201ENST00000635924 64 ntBASIC1.33□□□□□ -2.2
PRPF39Q86UA1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 SNORD116-13-201ENST00000384408 92 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 MIR891A-201ENST00000401237 79 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 Z98949.2-201ENST00000440996 144 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 RPL39P39-201ENST00000455840 151 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 RN7SKP295-201ENST00000517264 153 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 AC008269.2-201ENST00000561915 1105 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.32□□□□□ -2.2
PRPF39Q86UA1 AL357312.1-201ENST00000603879 298 ntBASIC1.32□□□□□ -2.2
PRPF39Q86UA1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.32□□□□□ -2.2
PRPF39Q86UA1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.32□□□□□ -2.2
PRPF39Q86UA1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 MIR653-201ENST00000385279 96 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 AC015922.2-201ENST00000435593 184 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 RNU7-152P-201ENST00000458982 64 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 CYCTP-201ENST00000504253 315 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 RNU6-917P-201ENST00000516294 104 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 RNU6-165P-201ENST00000517170 99 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.31□□□□□ -2.2
PRPF39Q86UA1 AC011604.1-201ENST00000545978 196 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.31□□□□□ -2.2
PRPF39Q86UA1 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 AL117336.2-201ENST00000602435 335 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 AC120024.3-201ENST00000603167 156 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 Y_RNA.772-201ENST00000606692 102 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 Y_RNA.804-201ENST00000615262 101 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.31□□□□□ -2.2
PRPF39Q86UA1 AC112487.2-201ENST00000637950 304 ntBASIC1.31□□□□□ -2.2
PRPF39Q86UA1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
PRPF39Q86UA1 Y_RNA.58-201ENST00000362807 102 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 Y_RNA.154-201ENST00000363624 102 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 RNY3P1-201ENST00000365085 102 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 RNY3-201ENST00000365484 102 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 RNU2-61P-201ENST00000411069 191 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 PIGPP3-201ENST00000425307 415 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 AC005042.3-201ENST00000453230 174 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.3□□□□□ -2.2
PRPF39Q86UA1 AL133373.1-201ENST00000497098 94 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 AC022616.4-201ENST00000522985 181 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 BX284668.6-201ENST00000606899 438 ntBASIC1.3□□□□□ -2.2
PRPF39Q86UA1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
PRPF39Q86UA1 MIRLET7C-201ENST00000362160 84 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 RNU6-1115P-201ENST00000362490 106 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 MLLT10P1-201ENST00000418346 262 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 AL160004.2-201ENST00000432935 350 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 SNORA31.4-201ENST00000516049 129 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 RNU6-436P-201ENST00000516171 114 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 SNORA70.22-201ENST00000517160 124 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 FAM106DP-201ENST00000586416 501 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 AC022441.3-201ENST00000605737 136 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 AL022345.2-201ENST00000606307 135 ntBASIC1.29□□□□□ -2.2
PRPF39Q86UA1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.2
PRPF39Q86UA1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 SNORD41-201ENST00000386967 70 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 MIR1276-201ENST00000408707 83 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 RNU6-855P-201ENST00000410395 104 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 RNU6-710P-201ENST00000410424 105 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 AL390729.2-201ENST00000416137 156 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 RNU6-976P-201ENST00000516086 111 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 MIR6504-201ENST00000613520 61 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 AL591926.4-201ENST00000616895 298 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 AC104985.2-201ENST00000620598 500 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 AC091812.1-201ENST00000432235 1948 ntBASIC1.28□□□□□ -2.2
PRPF39Q86UA1 RNU6-833P-201ENST00000363486 107 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 RNU6-53P-201ENST00000365367 106 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 MCFD2P1-201ENST00000417812 300 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 AC024067.1-201ENST00000426199 223 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.27□□□□□ -2.21
PRPF39Q86UA1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.27□□□□□ -2.21
PRPF39Q86UA1 MTND3P22-201ENST00000510932 243 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 MIR5188-201ENST00000583467 113 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 AC005972.2-201ENST00000604690 348 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 AC004832.4-201ENST00000608952 331 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
PRPF39Q86UA1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.252-201ENST00000364556 101 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.526-201ENST00000384572 110 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 MT-TD-201ENST00000387419 68 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
PRPF39Q86UA1 LINC01399-202ENST00000458450 244 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 AC048334.1-201ENST00000477975 159 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 AC114811.1-201ENST00000507207 168 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 RNU7-110P-201ENST00000516891 62 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 MIR4795-201ENST00000584182 89 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 AL050343.2-201ENST00000607338 280 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms