Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNA5SP445-201ENST00000515889 115 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 RNU6-397P-201ENST00000516226 104 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 RNU6-1046P-201ENST00000516538 107 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 AC044792.1-201ENST00000593294 196 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 AC005972.2-201ENST00000604690 348 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 AC004832.4-201ENST00000608952 331 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.49□□□□□ -2.17
LDB1Q86U70 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.48□□□□□ -2.17
LDB1Q86U70 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
LDB1Q86U70 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
LDB1Q86U70 RNA5SP432-201ENST00000362480 116 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 RNU6-855P-201ENST00000410395 104 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 AL354695.1-201ENST00000427935 228 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 AC027119.1-201ENST00000440877 241 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 MTCYBP6-201ENST00000441810 138 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 RPS20P10-201ENST00000451209 253 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 RNU6-897P-201ENST00000517135 105 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 SUMO2P16-201ENST00000519475 264 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 AC136932.1-201ENST00000574771 208 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 MIR4303-201ENST00000581299 66 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 DEFB117-201ENST00000602356 141 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 AL356055.1-201ENST00000602528 446 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 RAC1P9-201ENST00000604990 392 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 PRR13P7-201ENST00000605538 430 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 MIR376A1-201ENST00000616574 68 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 SNORD3E-202ENST00000627253 216 ntBASIC1.48□□□□□ -2.17
LDB1Q86U70 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
LDB1Q86U70 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
LDB1Q86U70 Y_RNA.341-201ENST00000365341 102 ntBASIC1.47□□□□□ -2.17
LDB1Q86U70 MIR660-201ENST00000385235 97 ntBASIC1.47□□□□□ -2.17
LDB1Q86U70 RPL30P13-201ENST00000418873 348 ntBASIC1.47□□□□□ -2.17
LDB1Q86U70 AC005534.2-201ENST00000431047 433 ntBASIC1.47□□□□□ -2.17
LDB1Q86U70 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.47□□□□□ -2.17
LDB1Q86U70 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
LDB1Q86U70 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
LDB1Q86U70 MIR3937-201ENST00000580135 106 ntBASIC1.47□□□□□ -2.17
LDB1Q86U70 MIR4300-201ENST00000581016 96 ntBASIC1.47□□□□□ -2.17
LDB1Q86U70 SNORD113-8-201ENST00000363497 74 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 RNU6-457P-201ENST00000363999 107 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 RNU4-76P-201ENST00000364509 141 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 Y_RNA.368-201ENST00000365547 113 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 Y_RNA.383-201ENST00000383855 97 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 RNU6-1227P-201ENST00000383981 107 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 Y_RNA.455-201ENST00000384230 98 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 Y_RNA.456-201ENST00000384232 111 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 RNU6-424P-201ENST00000384367 105 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 SNORA67.6-201ENST00000391093 99 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 Y_RNA.621-201ENST00000411065 96 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 POLR2KP2-201ENST00000438155 177 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 RNA5SP168-201ENST00000516642 112 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 AC011604.1-201ENST00000545978 196 ntBASIC1.46□□□□□ -2.18
LDB1Q86U70 RNU4-41P-201ENST00000364426 143 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 Y_RNA.310-201ENST00000365063 113 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 RNU6-1080P-201ENST00000383982 107 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 Y_RNA.527-201ENST00000384573 102 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 SNORD115-46-201ENST00000390982 71 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 SNORA17.3-201ENST00000391159 129 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 SNX2P2-201ENST00000424553 323 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 CALM2P4-201ENST00000430810 426 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 Z98949.2-201ENST00000440996 144 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 HMGN1P10-201ENST00000474557 553 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 AC010655.3-201ENST00000478818 450 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.45□□□□□ -2.18
LDB1Q86U70 MIR4680-201ENST00000580906 66 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 AL355297.3-201ENST00000604082 446 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 AL121890.5-201ENST00000620848 304 ntBASIC1.45□□□□□ -2.18
LDB1Q86U70 Y_RNA.140-201ENST00000363474 103 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 Y_RNA.286-201ENST00000364813 102 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 RNU6-1105P-201ENST00000384774 107 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 RNU6-1248P-201ENST00000391096 64 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 U8.16-201ENST00000391279 133 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 U8.19-201ENST00000459095 133 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 RNU6-1153P-201ENST00000516760 105 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 SNORA40.15-201ENST00000516884 107 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 AC113195.1-201ENST00000579952 141 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 MIR3145-201ENST00000580727 82 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.44□□□□□ -2.18
LDB1Q86U70 AL365434.2-201ENST00000607979 234 ntBASIC1.44□□□□□ -2.18
LDB1Q86U70 RNU4-90P-201ENST00000362773 141 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 Y_RNA.152-201ENST00000363578 100 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 Y_RNA.222-201ENST00000364264 102 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 Y_RNA.276-201ENST00000364732 109 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 SNORA33.2-201ENST00000365413 134 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 RNU6-1323P-201ENST00000384025 107 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 SNORA72-201ENST00000384339 132 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.43□□□□□ -2.18
LDB1Q86U70 RPS27P16-201ENST00000425758 201 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 RNU7-12P-201ENST00000516030 62 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 RNA5SP458-201ENST00000516188 119 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 RNU7-116P-201ENST00000516940 62 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 AC131281.1-201ENST00000522984 164 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 MIR4778-201ENST00000577635 80 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms