Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNA5SP38-201ENST00000410750 119 ntBASIC2.88□□□□□ -1.95
ATG4DQ86TL0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4DQ86TL0 RNU6-162P-201ENST00000516228 103 ntBASIC2.88□□□□□ -1.95
ATG4DQ86TL0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.88□□□□□ -1.95
ATG4DQ86TL0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.88□□□□□ -1.95
ATG4DQ86TL0 MIR3202-2-201ENST00000635980 79 ntBASIC2.88□□□□□ -1.95
ATG4DQ86TL0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.88□□□□□ -1.95
ATG4DQ86TL0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
ATG4DQ86TL0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
ATG4DQ86TL0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
ATG4DQ86TL0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.87□□□□□ -1.95
ATG4DQ86TL0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4DQ86TL0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4DQ86TL0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ATG4DQ86TL0 RNU4-36P-201ENST00000364294 144 ntBASIC2.87□□□□□ -1.95
ATG4DQ86TL0 MIR1253-201ENST00000408273 105 ntBASIC2.87□□□□□ -1.95
ATG4DQ86TL0 AC009238.1-201ENST00000442165 424 ntBASIC2.87□□□□□ -1.95
ATG4DQ86TL0 AC009237.6-201ENST00000446969 424 ntBASIC2.87□□□□□ -1.95
ATG4DQ86TL0 AC006483.1-201ENST00000487308 313 ntBASIC2.87□□□□□ -1.95
ATG4DQ86TL0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4DQ86TL0 RNU7-61P-201ENST00000515897 61 ntBASIC2.87□□□□□ -1.95
ATG4DQ86TL0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ATG4DQ86TL0 FAM35CP-201ENST00000554755 2470 ntBASIC2.87□□□□□ -1.95
ATG4DQ86TL0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4DQ86TL0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4DQ86TL0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4DQ86TL0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.86□□□□□ -1.95
ATG4DQ86TL0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ATG4DQ86TL0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.86□□□□□ -1.95
ATG4DQ86TL0 HMGN2P34-201ENST00000437647 269 ntBASIC2.86□□□□□ -1.95
ATG4DQ86TL0 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
ATG4DQ86TL0 RNA5SP490-201ENST00000517141 136 ntBASIC2.86□□□□□ -1.95
ATG4DQ86TL0 MIR3163-201ENST00000581592 73 ntBASIC2.86□□□□□ -1.95
ATG4DQ86TL0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.86□□□□□ -1.95
ATG4DQ86TL0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.86□□□□□ -1.95
ATG4DQ86TL0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 MIR126-201ENST00000362291 85 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNU6-1276P-201ENST00000365372 104 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNY1P6-201ENST00000384193 109 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNU6-644P-201ENST00000391155 98 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 MIR548O-201ENST00000408583 114 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RPS27P29-201ENST00000463110 252 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNU6-795P-201ENST00000516323 103 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNU2-34P-201ENST00000516534 121 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNU6-521P-201ENST00000516663 105 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNU7-6P-201ENST00000516845 62 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 RNU7-70P-201ENST00000516941 66 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 SNORA31.21-201ENST00000517180 77 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 HSPE1P19-201ENST00000603327 295 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 U2.20-201ENST00000613956 192 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 ZNF271P-202ENST00000465539 1970 ntBASIC2.85□□□□□ -1.95
ATG4DQ86TL0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4DQ86TL0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
ATG4DQ86TL0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATG4DQ86TL0 MIR148B-201ENST00000362252 99 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 RNU1-72P-201ENST00000362976 153 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 RNU6-1099P-201ENST00000363533 107 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 SNORA33-201ENST00000363664 130 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 RNU6-743P-201ENST00000364151 106 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 RNU6-787P-201ENST00000384032 107 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 SNORA7.4-201ENST00000384249 137 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 RN7SL863P-201ENST00000462370 296 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.84□□□□□ -1.95
ATG4DQ86TL0 AC092185.1-201ENST00000491371 97 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 RNU2-35P-201ENST00000516446 142 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 RNA5SP367-201ENST00000516557 118 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 SNORD36C-201ENST00000516733 66 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 RNU6-586P-201ENST00000517265 104 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 AC245166.1-201ENST00000521012 253 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 MIR548Z-201ENST00000584743 97 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.84□□□□□ -1.95
ATG4DQ86TL0 U7.3-201ENST00000616123 62 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 AC012531.4-201ENST00000616509 177 ntBASIC2.84□□□□□ -1.95
ATG4DQ86TL0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATG4DQ86TL0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.83□□□□□ -1.96
ATG4DQ86TL0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
ATG4DQ86TL0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.83□□□□□ -1.96
ATG4DQ86TL0 RNU1-96P-201ENST00000364163 162 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 RNU1-133P-201ENST00000364867 167 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.410-201ENST00000383992 113 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 RNU6-242P-201ENST00000384359 107 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.531-201ENST00000384589 121 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 SNORA46-201ENST00000384762 135 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 MIR1912-201ENST00000410389 80 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 RNU4-47P-201ENST00000410876 114 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 AP001486.1-201ENST00000463339 476 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms