Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MTCYBP6-201ENST00000441810 138 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 AC019176.1-201ENST00000518519 225 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 AL161670.1-201ENST00000554348 137 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 SNORD113-5-201ENST00000607261 78 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 AC004832.4-201ENST00000608952 331 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 RNU4-13P-201ENST00000364019 141 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.202-201ENST00000364083 110 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 RNU6-450P-201ENST00000364654 107 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 RNU4-30P-201ENST00000410245 143 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 RPS4XP11-201ENST00000446897 772 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 AC233266.1-201ENST00000454518 96 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 AL049830.1-201ENST00000468034 425 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 OR9P1P-201ENST00000496431 281 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 SEPT14P8-201ENST00000508026 178 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 AC136932.1-201ENST00000574771 208 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 AL356055.1-201ENST00000602528 446 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 RAC1P9-201ENST00000604990 392 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 AC242852.1-201ENST00000612151 96 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 AC244015.1-201ENST00000622301 99 ntBASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.42□□□□□ -2.18
NUP54Q7Z3B4 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 RNU4-76P-201ENST00000364509 141 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 MIR660-201ENST00000385235 97 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 RPS20P10-201ENST00000451209 253 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 RNU6-1046P-201ENST00000516538 107 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 RNU6-897P-201ENST00000517135 105 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 AC044792.1-201ENST00000593294 196 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 AC005972.2-201ENST00000604690 348 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 MIR376A1-201ENST00000616574 68 ntBASIC1.41□□□□□ -2.18
NUP54Q7Z3B4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
NUP54Q7Z3B4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 RNA5SP99-201ENST00000364020 114 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.216-201ENST00000364205 93 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.368-201ENST00000365547 113 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 RNU6-1227P-201ENST00000383981 107 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.455-201ENST00000384230 98 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 SNORD115-46-201ENST00000390982 71 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 RNU6-855P-201ENST00000410395 104 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 AC005534.2-201ENST00000431047 433 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 RNU6-397P-201ENST00000516226 104 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 SUMO2P16-201ENST00000519475 264 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 MIR4680-201ENST00000580906 66 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 MIR4300-201ENST00000581016 96 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 DEFB117-201ENST00000602356 141 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 SNORD3E-202ENST00000627253 216 ntBASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
NUP54Q7Z3B4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 RNU6-457P-201ENST00000363999 107 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.310-201ENST00000365063 113 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 RNA5SP259-201ENST00000365541 109 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.456-201ENST00000384232 111 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 RNU6-424P-201ENST00000384367 105 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 HMGN1P10-201ENST00000474557 553 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 RNA5SP168-201ENST00000516642 112 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 AL355297.3-201ENST00000604082 446 ntBASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NUP54Q7Z3B4 SNORD113-8-201ENST00000363497 74 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.222-201ENST00000364264 102 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.276-201ENST00000364732 109 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.383-201ENST00000383855 97 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 U8.16-201ENST00000391279 133 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 CALM2P4-201ENST00000430810 426 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 POLR2KP2-201ENST00000438155 177 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 U8.19-201ENST00000459095 133 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 AC010655.3-201ENST00000478818 450 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 AC011604.1-201ENST00000545978 196 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 AL160236.1-201ENST00000556317 195 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 AC113195.1-201ENST00000579952 141 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 MIR4769-201ENST00000584126 77 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 MIR8065-201ENST00000620577 100 ntBASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
NUP54Q7Z3B4 RNU4-41P-201ENST00000364426 143 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.286-201ENST00000364813 102 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 SNORA33.2-201ENST00000365413 134 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 SNORA72-201ENST00000384339 132 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 RNU6-1248P-201ENST00000391096 64 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 Z98949.2-201ENST00000440996 144 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms