Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 MTCYBP36-201ENST00000404146 440 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 SNORD93-201ENST00000408813 74 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 SSR1P2-201ENST00000415208 787 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 BX276092.1-201ENST00000427368 251 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AL445193.1-201ENST00000441183 141 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AL500527.2-201ENST00000454105 95 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 GMFBP1-201ENST00000467831 427 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AF186996.7-201ENST00000492781 209 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 RNU6-551P-201ENST00000516661 103 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 RNU6-881P-201ENST00000516813 102 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AP000811.1-201ENST00000603803 651 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 AC022960.3-201ENST00000619794 441 ntBASIC-1.18□□□□□ -2.6
CCDC141Q6ZP82 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
CCDC141Q6ZP82 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.19□□□□□ -2.6
CCDC141Q6ZP82 AL512286.1-201ENST00000439244 400 ntBASIC-1.19□□□□□ -2.6
CCDC141Q6ZP82 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.19□□□□□ -2.6
CCDC141Q6ZP82 AL359999.1-201ENST00000604513 294 ntBASIC-1.19□□□□□ -2.6
CCDC141Q6ZP82 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 RNU6-641P-201ENST00000384006 107 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 SNORA40.2-201ENST00000390847 128 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 RNU6-298P-201ENST00000390888 96 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 SNORA75.4-201ENST00000391278 119 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 MIR320B2-201ENST00000408479 138 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 AL138752.1-201ENST00000452964 351 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 MTCO2P6-201ENST00000463134 685 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 AC093303.1-201ENST00000514549 295 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 RNU6-475P-201ENST00000516073 104 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 SNORA27.4-201ENST00000516650 95 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 AC091144.1-201ENST00000519573 138 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 MTND5P34-201ENST00000568888 325 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 AC097460.3-201ENST00000623099 442 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 AC013437.2-201ENST00000639587 677 ntBASIC-1.2□□□□□ -2.6
CCDC141Q6ZP82 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 RNU6-723P-201ENST00000383973 107 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 SNORA25.14-201ENST00000516481 132 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 SNORA25.17-201ENST00000517184 124 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 AC121334.2-201ENST00000605387 271 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 RNU6-86P-201ENST00000606534 107 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 AC002044.1-201ENST00000606707 158 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 AC127459.3-201ENST00000624328 466 ntBASIC-1.21□□□□□ -2.6
CCDC141Q6ZP82 MIR30D-201ENST00000362283 70 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 RNA5SP245-201ENST00000364239 121 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 RNU6-117P-201ENST00000365415 107 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 RNU6-291P-201ENST00000384720 107 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 AL137792.2-201ENST00000443484 235 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 RNU6-135P-201ENST00000516769 101 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 AC022784.5-201ENST00000522241 437 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 MTND4P33-201ENST00000556706 766 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 POLR3GP1-201ENST00000594073 261 ntBASIC-1.22□□□□□ -2.6
CCDC141Q6ZP82 RNU6-403P-201ENST00000363163 104 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 RNU6-433P-201ENST00000363216 104 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 RNU6-535P-201ENST00000384722 107 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 MTND1P14-201ENST00000427400 950 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 MTND3P9-201ENST00000429526 346 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 snoU13.2-201ENST00000459201 104 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 SNORA25.10-201ENST00000515926 124 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 SNORD38.3-201ENST00000516599 73 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 MIR4280-201ENST00000582178 76 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 BNIP3P40-201ENST00000596017 556 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 AC006441.5-201ENST00000612680 209 ntBASIC-1.23□□□□□ -2.61
CCDC141Q6ZP82 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 SNORA27.1-201ENST00000362604 124 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 SNORA63C-201ENST00000364578 129 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 SNORD115-7-201ENST00000365306 82 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 RNU6-455P-201ENST00000384681 107 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 SNORD38B-201ENST00000384690 67 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 MIR601-201ENST00000385256 79 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 RPL7P42-201ENST00000481005 679 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 AC021146.6-201ENST00000514659 117 ntBASIC-1.24□□□□□ -2.61
CCDC141Q6ZP82 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms