Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 RNU6-508P-201ENST00000363231 103 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 SNORD46.1-201ENST00000364139 104 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 U8.5-201ENST00000364528 136 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 Y_RNA.346-201ENST00000365385 112 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 SNORA11.4-201ENST00000408823 129 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 AL021397.1-201ENST00000451806 248 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 AL109933.2-201ENST00000452651 260 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 TRBV12-1-201ENST00000479785 344 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 RN7SL297P-201ENST00000483161 293 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 RN7SKP19-201ENST00000516016 252 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 AC012314.7-201ENST00000619693 93 ntBASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.84□□□□□ -1.95
LRFN4Q6PJG9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LRFN4Q6PJG9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
LRFN4Q6PJG9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.84□□□□□ -1.96
LRFN4Q6PJG9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 SNORA63.4-201ENST00000362763 126 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 SNORD68-201ENST00000363214 84 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 SNORD14E-201ENST00000364009 85 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 SNORA70.4-201ENST00000365509 134 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 RNU6-442P-201ENST00000383968 104 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 MIR34B-201ENST00000385076 84 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 MIRLET7F2-201ENST00000385277 83 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 MIR548A3-201ENST00000385297 97 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 SNORD77.3-201ENST00000391113 65 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 AC099677.2-201ENST00000436385 175 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 Z96811.1-201ENST00000445880 108 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 PRSS3P4-201ENST00000453323 162 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 RNU6-113P-201ENST00000516653 101 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 AC108081.1-201ENST00000604358 221 ntBASIC2.83□□□□□ -1.96
LRFN4Q6PJG9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 AC073346.2-201ENST00000624724 2058 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 RNU6-755P-201ENST00000364400 103 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 RNA5SP267-201ENST00000364893 126 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 MIR518F-201ENST00000384973 87 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 MIR29C-201ENST00000385231 88 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 RNA5SP482-201ENST00000391269 118 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 AC005326.1-201ENST00000429197 123 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 RNU6-781P-201ENST00000516377 101 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 RNU7-28P-201ENST00000516759 62 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 AC006441.5-201ENST00000612680 209 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 uc_338.25-201ENST00000613756 156 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 AL121890.5-201ENST00000620848 304 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 MIR6733-201ENST00000635723 61 ntBASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRFN4Q6PJG9 MIR208A-201ENST00000362287 71 ntBASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 AC245047.3-201ENST00000429428 127 ntBASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 CYCTP-201ENST00000504253 315 ntBASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 RNU6-1149P-201ENST00000516810 97 ntBASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 AC005786.1-201ENST00000588553 154 ntBASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 AC025166.1-201ENST00000612411 163 ntBASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRFN4Q6PJG9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 Y_RNA.410-201ENST00000383992 113 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 SNORD116-21-201ENST00000384507 92 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 RNVU1-14-201ENST00000384770 164 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 MIR548O-201ENST00000408583 114 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 RNA5SP120-201ENST00000410900 112 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 MIR5197-201ENST00000583721 112 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 MIR7112-201ENST00000616126 65 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 AC134878.1-201ENST00000619901 243 ntBASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRFN4Q6PJG9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 RNU1-58P-201ENST00000362413 163 ntBASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 RNU4-47P-201ENST00000410876 114 ntBASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 SCARNA15-202ENST00000516881 127 ntBASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 AC007179.3-201ENST00000604976 235 ntBASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRFN4Q6PJG9 SNORD115-3-201ENST00000363100 82 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms