Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU7-128P-201ENST00000517247 62 ntBASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 AL513534.2-201ENST00000603836 250 ntBASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 Y_RNA.773-201ENST00000607168 90 ntBASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 AC002076.2-201ENST00000617362 122 ntBASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 AC087741.2-201ENST00000619415 172 ntBASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 U4.6-201ENST00000621618 127 ntBASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXR1Q6PIV2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 RNU6-170P-201ENST00000362832 104 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 RNU6-1296P-201ENST00000383879 107 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 RNU6-675P-201ENST00000384236 104 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 MIR1912-201ENST00000410389 80 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 RNA5SP38-201ENST00000410750 119 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 RNA5SP120-201ENST00000410900 112 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 RNU6-938P-201ENST00000411285 103 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 MIR5588-201ENST00000581890 63 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 AP000553.6-201ENST00000641242 118 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 AC091304.10-201ENST00000641554 121 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 ZNF271P-202ENST00000465539 1970 ntBASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXR1Q6PIV2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
FOXR1Q6PIV2 ICE2P2-201ENST00000483823 2787 ntBASIC3.46□□□□□ -1.85
FOXR1Q6PIV2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 RNU1-96P-201ENST00000364163 162 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 Y_RNA.267-201ENST00000364679 109 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 RNU4-16P-201ENST00000364737 141 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 SNORA14A-201ENST00000364773 135 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 Y_RNA.437-201ENST00000384113 113 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 MIR577-201ENST00000385196 96 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 AL451046.2-201ENST00000403074 277 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 RN7SKP123-201ENST00000410732 291 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 AC004941.2-201ENST00000427009 228 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 AP001486.1-201ENST00000463339 476 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 MIR4765-201ENST00000585007 77 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 MIR7851-201ENST00000610611 160 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 AL356274.2-201ENST00000624379 3752 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.46□□□□□ -1.86
FOXR1Q6PIV2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 RNU4-35P-201ENST00000362588 141 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 Y_RNA.37-201ENST00000362606 108 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 RNU6-743P-201ENST00000364151 106 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 RNU1-133P-201ENST00000364867 167 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 Y_RNA.410-201ENST00000383992 113 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 MIR522-201ENST00000385071 87 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 MIR605-201ENST00000385078 83 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 AC060773.1-201ENST00000421698 310 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 HMGN2P34-201ENST00000437647 269 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 RNU1-131P-201ENST00000458943 161 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 MIR3618-201ENST00000580330 88 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 MIR4777-201ENST00000583710 86 ntBASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
FOXR1Q6PIV2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 MIR340-201ENST00000362125 95 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 Y_RNA.440-201ENST00000384120 114 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 Y_RNA.547-201ENST00000384654 119 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 MIR1253-201ENST00000408273 105 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 CYCSP4-201ENST00000429682 331 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 AC244505.4-201ENST00000434905 287 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 SSXP5-201ENST00000443473 287 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 RNU2-34P-201ENST00000516534 121 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 MIR4666B-201ENST00000578142 81 ntBASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXR1Q6PIV2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 RNU6-832P-201ENST00000363319 107 ntBASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 Y_RNA.360-201ENST00000365512 102 ntBASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 AL353813.1-201ENST00000440700 253 ntBASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 AC115115.1-201ENST00000449927 248 ntBASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 RNU7-70P-201ENST00000516941 66 ntBASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 MIR4506-201ENST00000584693 77 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms