Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.7□□□□□ -1.98
E4F1Q66K89 MIR6079-201ENST00000635807 62 ntBASIC2.7□□□□□ -1.98
E4F1Q66K89 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
E4F1Q66K89 RNA5SP456-201ENST00000364002 114 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 RNU1-51P-201ENST00000365345 176 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 Y_RNA.393-201ENST00000383936 102 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 Y_RNA.586-201ENST00000391146 98 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 RNU2-70P-201ENST00000410718 179 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.69□□□□□ -1.98
E4F1Q66K89 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.69□□□□□ -1.98
E4F1Q66K89 SNORD109B-201ENST00000458961 67 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 SNORD11-201ENST00000459124 84 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 SNORD109A-201ENST00000459128 67 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
E4F1Q66K89 RNU6-197P-201ENST00000516680 100 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 MIR548AI-201ENST00000579940 88 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 MIR378D2-201ENST00000580636 98 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 MIR3200-201ENST00000580767 85 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 AC091178.2-201ENST00000584401 117 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 U6.108-201ENST00000637764 58 ntBASIC2.69□□□□□ -1.98
E4F1Q66K89 AC005336.3-201ENST00000623833 2679 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 AC018630.2-201ENST00000534866 2403 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 SNORA38-201ENST00000363946 132 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 Y_RNA.291-201ENST00000364886 113 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 RNU6-484P-201ENST00000384016 107 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 RNU6-588P-201ENST00000410281 105 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 RN7SKP284-201ENST00000411002 343 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 RNU2-55P-201ENST00000411146 174 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 TRBV12-1-201ENST00000479785 344 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 CYCSP26-201ENST00000534107 320 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 MIR3126-201ENST00000577443 74 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 AL049779.4-201ENST00000604500 156 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
E4F1Q66K89 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
E4F1Q66K89 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
E4F1Q66K89 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
E4F1Q66K89 ZNF720P1-201ENST00000562403 1939 ntBASIC2.68□□□□□ -1.98
E4F1Q66K89 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
E4F1Q66K89 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
E4F1Q66K89 RNU6-859P-201ENST00000362728 107 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 RNU6-1164P-201ENST00000364428 107 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 Y_RNA.333-201ENST00000365274 102 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 RNU1-109P-201ENST00000383960 147 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 SNORA9-201ENST00000384215 133 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 RNU6-1117P-201ENST00000384525 104 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 SNORA40-201ENST00000388090 126 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 AL117342.1-201ENST00000404861 406 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 AC018634.1-201ENST00000437554 401 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 AL049873.1-201ENST00000480540 376 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.67□□□□□ -1.98
E4F1Q66K89 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 SNORD77.4-201ENST00000516158 81 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 RNU7-149P-201ENST00000516739 59 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 MIR3646-201ENST00000578301 84 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 Pinc.1-201ENST00000616452 154 ntBASIC2.67□□□□□ -1.98
E4F1Q66K89 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
E4F1Q66K89 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
E4F1Q66K89 Y_RNA.420-201ENST00000384043 110 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 RNU6-959P-201ENST00000384671 107 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 MLLT10P1-201ENST00000418346 262 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 CST2P1-201ENST00000425770 87 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.66□□□□□ -1.98
E4F1Q66K89 SNRPGP10-201ENST00000432323 225 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 AC108938.1-201ENST00000451204 136 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 HMGN1P7-201ENST00000491722 313 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 AL163195.1-201ENST00000496941 348 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 RNU6-341P-201ENST00000516973 96 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 MIR3169-201ENST00000578032 83 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 AC120024.3-201ENST00000603167 156 ntBASIC2.66□□□□□ -1.98
E4F1Q66K89 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
E4F1Q66K89 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
E4F1Q66K89 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
E4F1Q66K89 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
E4F1Q66K89 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
E4F1Q66K89 Y_RNA.91-201ENST00000363042 107 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 Y_RNA.253-201ENST00000364562 112 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 RNU6-1336P-201ENST00000383886 109 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 MIR515-2-201ENST00000384883 83 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 MIR515-1-201ENST00000384884 83 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 MIR562-201ENST00000384894 95 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 SNORA12.1-201ENST00000390873 148 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 SNORA75.5-201ENST00000391291 81 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.65□□□□□ -1.99
E4F1Q66K89 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.65□□□□□ -1.99
E4F1Q66K89 OR9P1P-201ENST00000496431 281 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 GTF3AP2-201ENST00000557014 266 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 AC080100.1-201ENST00000624239 5356 ntBASIC2.65□□□□□ -1.99
E4F1Q66K89 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
E4F1Q66K89 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.64□□□□□ -1.99
E4F1Q66K89 AP006437.1-201ENST00000641440 3685 ntBASIC2.64□□□□□ -1.99
E4F1Q66K89 RNU6-1081P-201ENST00000384537 107 ntBASIC2.64□□□□□ -1.99
E4F1Q66K89 RNU6-460P-201ENST00000391158 108 ntBASIC2.64□□□□□ -1.99
E4F1Q66K89 MTND4LP9-201ENST00000427694 174 ntBASIC2.64□□□□□ -1.99
E4F1Q66K89 AC099677.2-201ENST00000436385 175 ntBASIC2.64□□□□□ -1.99
E4F1Q66K89 AC092991.1-201ENST00000477176 376 ntBASIC2.64□□□□□ -1.99
E4F1Q66K89 SNORA70.24-201ENST00000517233 118 ntBASIC2.64□□□□□ -1.99
E4F1Q66K89 AC090142.3-201ENST00000519012 385 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 271.7 ms