Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
GFI1BQ5VTD9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
GFI1BQ5VTD9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RNU6-674P-201ENST00000363831 107 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RNU4-41P-201ENST00000364426 143 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RNA5SP138-201ENST00000365098 114 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RNY3P5-201ENST00000384127 102 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 MIR767-201ENST00000390228 109 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 Y_RNA.584-201ENST00000391090 114 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RPS4XP11-201ENST00000446897 772 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AC245102.2-201ENST00000448956 180 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RPL36AP21-201ENST00000490372 323 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AC010598.1-201ENST00000510378 103 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RNU6-781P-201ENST00000516377 101 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RNU6-197P-201ENST00000516680 100 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 RNU6-965P-201ENST00000516721 96 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 MTND5P34-201ENST00000568888 325 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 MIR3613-201ENST00000579844 87 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 SNORD53-201ENST00000579969 78 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AC005000.2-201ENST00000605468 310 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AC006386.2-201ENST00000624491 75 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AC012005.1-201ENST00000624575 75 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AL136360.1-201ENST00000503377 1900 ntBASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
GFI1BQ5VTD9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 MIR340-201ENST00000362125 95 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 RNU6-309P-201ENST00000364573 106 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 MIR524-201ENST00000385242 87 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 RPL30P4-201ENST00000429309 333 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 AC016925.1-201ENST00000458303 298 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 SNORD11-201ENST00000459124 84 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 AC080013.2-201ENST00000460866 323 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 CYCTP-201ENST00000504253 315 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 CYCSP26-201ENST00000534107 320 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 AC090049.2-201ENST00000550377 109 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 MIR7106-201ENST00000612419 65 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 MIR4679-1-201ENST00000637619 75 ntBASIC1.84□□□□□ -2.11
GFI1BQ5VTD9 Y_RNA.114-201ENST00000363265 113 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 RNA5SP456-201ENST00000364002 114 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 RNU6-755P-201ENST00000364400 103 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 SNORD31B-201ENST00000364977 69 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 RNU6-147P-201ENST00000383983 107 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 SNORA11.1-201ENST00000408133 129 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 AC063976.4-201ENST00000421971 163 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 AC063976.3-201ENST00000426849 329 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 AL158147.1-201ENST00000443970 75 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 YWHAEP4-201ENST00000505390 198 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 IGKV1-22-201ENST00000524313 326 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 MIR3121-201ENST00000579680 77 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 MIR4765-201ENST00000585007 77 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 MIR4753-201ENST00000585119 83 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 AL670379.2-201ENST00000604983 252 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 RPL17P51-201ENST00000605218 238 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 AC013412.1-201ENST00000610687 192 ntBASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.83□□□□□ -2.12
GFI1BQ5VTD9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 RNU1-22P-201ENST00000363334 158 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 SNORA22-201ENST00000383907 134 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 Y_RNA.432-201ENST00000384087 111 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 MIR627-201ENST00000384979 97 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 MIR29B2-201ENST00000385055 81 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 MIR300-201ENST00000401138 83 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 AC104389.3-201ENST00000445629 235 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 Y_RNA.651-201ENST00000459380 103 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 SNORD77.4-201ENST00000516158 81 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 AC090142.3-201ENST00000519012 385 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 AC007751.1-201ENST00000529260 376 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 RPL23AP91-201ENST00000569211 455 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 MIR4319-201ENST00000577285 85 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 AL033523.1-201ENST00000605153 153 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 AL365361.1-201ENST00000566942 3481 ntBASIC1.82□□□□□ -2.12
GFI1BQ5VTD9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
GFI1BQ5VTD9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
GFI1BQ5VTD9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
GFI1BQ5VTD9 Y_RNA.35-201ENST00000362601 101 ntBASIC1.81□□□□□ -2.12
GFI1BQ5VTD9 RNU1-23P-201ENST00000363361 144 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms