Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RC3H1Q5TC82 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RC3H1Q5TC82 RNU6-944P-201ENST00000364023 107 ntBASIC3.92□□□□□ -1.78
RC3H1Q5TC82 Y_RNA.242-201ENST00000364473 110 ntBASIC3.92□□□□□ -1.78
RC3H1Q5TC82 RNU6-787P-201ENST00000384032 107 ntBASIC3.92□□□□□ -1.78
RC3H1Q5TC82 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.92□□□□□ -1.78
RC3H1Q5TC82 MIR2276-201ENST00000516886 89 ntBASIC3.92□□□□□ -1.78
RC3H1Q5TC82 AC006111.3-201ENST00000622137 383 ntBASIC3.92□□□□□ -1.78
RC3H1Q5TC82 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RC3H1Q5TC82 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RC3H1Q5TC82 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RC3H1Q5TC82 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RC3H1Q5TC82 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RC3H1Q5TC82 Y_RNA.73-201ENST00000362910 113 ntBASIC3.91□□□□□ -1.78
RC3H1Q5TC82 RNU6-1099P-201ENST00000363533 107 ntBASIC3.91□□□□□ -1.78
RC3H1Q5TC82 Y_RNA.253-201ENST00000364562 112 ntBASIC3.91□□□□□ -1.78
RC3H1Q5TC82 Y_RNA.410-201ENST00000383992 113 ntBASIC3.91□□□□□ -1.78
RC3H1Q5TC82 AC105272.1-201ENST00000438604 198 ntBASIC3.91□□□□□ -1.78
RC3H1Q5TC82 RPL30P14-201ENST00000482744 348 ntBASIC3.91□□□□□ -1.78
RC3H1Q5TC82 AC002076.2-201ENST00000617362 122 ntBASIC3.91□□□□□ -1.78
RC3H1Q5TC82 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
RC3H1Q5TC82 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.91□□□□□ -1.78
RC3H1Q5TC82 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RC3H1Q5TC82 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RC3H1Q5TC82 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RC3H1Q5TC82 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.9□□□□□ -1.78
RC3H1Q5TC82 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RC3H1Q5TC82 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RC3H1Q5TC82 SNORD67-201ENST00000390833 111 ntBASIC3.9□□□□□ -1.79
RC3H1Q5TC82 RNA5SP184-201ENST00000411071 108 ntBASIC3.9□□□□□ -1.79
RC3H1Q5TC82 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.9□□□□□ -1.79
RC3H1Q5TC82 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.9□□□□□ -1.79
RC3H1Q5TC82 RNU7-61P-201ENST00000515897 61 ntBASIC3.9□□□□□ -1.79
RC3H1Q5TC82 RNU7-123P-201ENST00000515911 60 ntBASIC3.9□□□□□ -1.79
RC3H1Q5TC82 AP000867.2-201ENST00000532468 320 ntBASIC3.9□□□□□ -1.79
RC3H1Q5TC82 AC022523.2-201ENST00000561045 150 ntBASIC3.9□□□□□ -1.79
RC3H1Q5TC82 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.9□□□□□ -1.79
RC3H1Q5TC82 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RC3H1Q5TC82 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RC3H1Q5TC82 Y_RNA.10-201ENST00000362371 110 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 RNU6-438P-201ENST00000365561 103 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 RNU6-1189P-201ENST00000383958 107 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 RNU1-101P-201ENST00000391171 127 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 AC022018.1-201ENST00000430685 241 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 Z98742.2-201ENST00000431564 187 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 AC108938.1-201ENST00000451204 136 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 RNU6-711P-201ENST00000517255 106 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 AC090115.4-201ENST00000609970 188 ntBASIC3.89□□□□□ -1.79
RC3H1Q5TC82 FAM35CP-201ENST00000554755 2470 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RC3H1Q5TC82 AL353746.1-201ENST00000566293 6881 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 AC062016.1-201ENST00000355719 319 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 RNU6-1125P-201ENST00000363601 107 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 RNY1P6-201ENST00000384193 109 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 RNU6-1274P-201ENST00000384557 107 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 RNU6-851P-201ENST00000384565 107 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 AL353689.1-201ENST00000438895 199 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 AC009238.1-201ENST00000442165 424 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 AC009237.6-201ENST00000446969 424 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.88□□□□□ -1.79
RC3H1Q5TC82 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.88□□□□□ -1.79
RC3H1Q5TC82 MIR4319-201ENST00000577285 85 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 AC087685.1-201ENST00000587507 141 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 U7.3-201ENST00000616123 62 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 AC096644.4-201ENST00000563417 2912 ntBASIC3.88□□□□□ -1.79
RC3H1Q5TC82 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
RC3H1Q5TC82 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
RC3H1Q5TC82 SNORA33-201ENST00000363664 130 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 RNU6-644P-201ENST00000391155 98 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 AL451046.2-201ENST00000403074 277 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 AC096949.1-201ENST00000412047 152 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 AC233266.1-201ENST00000454518 96 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 SCGB1D5P-201ENST00000515134 247 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 RNU7-70P-201ENST00000516941 66 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RC3H1Q5TC82 AC242852.1-201ENST00000612151 96 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 AC244015.1-201ENST00000622301 99 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RC3H1Q5TC82 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.87□□□□□ -1.79
RC3H1Q5TC82 AC093908.1-201ENST00000623125 8092 ntBASIC3.87□□□□□ -1.79
RC3H1Q5TC82 RNU6-675P-201ENST00000384236 104 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.86□□□□□ -1.79
RC3H1Q5TC82 AL109933.2-201ENST00000452651 260 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 RNU1-131P-201ENST00000458943 161 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 RNU7-6P-201ENST00000516845 62 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 SNORD59.2-201ENST00000516873 68 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 AC103810.1-201ENST00000579873 453 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 MIR4305-201ENST00000583252 102 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 AC073413.2-201ENST00000604332 360 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 AC022217.4-201ENST00000604389 163 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 SNORA50A-202ENST00000629536 136 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RC3H1Q5TC82 AL355596.1-201ENST00000565399 3996 ntBASIC3.86□□□□□ -1.79
RC3H1Q5TC82 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.86□□□□□ -1.79
RC3H1Q5TC82 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RC3H1Q5TC82 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RC3H1Q5TC82 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RC3H1Q5TC82 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RC3H1Q5TC82 RNU6-979P-201ENST00000383896 107 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms